==1165607== Memcheck, a memory error detector ==1165607== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1165607== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1165607== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==1165607== Parent PID: 1164611 ==1165607== ==1165607== ==1165607== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1165607== Open file descriptor 12: ==1165607== at 0x6F9A22D: pipe (pipe.c:29) ==1165607== by 0x1012C07D: ??? ==1165607== by 0xC25B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1165607== by 0x8A0F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165607== by 0x89A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165607== by 0x72E8D38: PetscInitialize (pinit.c:924) ==1165607== by 0x654EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1165607== by 0x654F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1165607== by 0x1213CA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1165607== by 0x11CA13: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1165607== by 0x11F466: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1165607== by 0x11F361: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1165607== by 0x11F975: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1165607== by 0x11B215: main (TestHdf5Converters.cpp:18) ==1165607== ==1165607== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1165607== at 0x6F9EBCC: __open_nocancel (open64_nocancel.c:39) ==1165607== by 0x6F22C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1165607== by 0x6583822: ??? ==1165607== by 0x658396F: ??? ==1165607== by 0xC3006DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165607== by 0xC300938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165607== by 0xC2B6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1165607== by 0xC25B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1165607== by 0x8A0F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165607== by 0x89A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1165607== by 0x72E8D38: PetscInitialize (pinit.c:924) ==1165607== by 0x654EFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1165607== by 0x654F01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1165607== by 0x1213CA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1165607== by 0x11CA13: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1165607== by 0x11F466: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1165607== by 0x11F361: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1165607== by 0x11F975: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1165607== by 0x11B215: main (TestHdf5Converters.cpp:18) ==1165607== ==1165607== Open file descriptor 116: ==1165607== ==1165607== ==1165607== Open file descriptor 112: ==1165607== ==1165607== ==1165607== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==1165607== ==1165607== ==1165607== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1165607== ==1165607== ==1165607== ==1165607== HEAP SUMMARY: ==1165607== in use at exit: 700,663 bytes in 9,377 blocks ==1165607== total heap usage: 208,769 allocs, 199,392 frees, 1,409,973,178 bytes allocated ==1165607== ==1165607== LEAK SUMMARY: ==1165607== definitely lost: 0 bytes in 0 blocks ==1165607== indirectly lost: 0 bytes in 0 blocks ==1165607== possibly lost: 0 bytes in 0 blocks ==1165607== still reachable: 24 bytes in 2 blocks ==1165607== suppressed: 700,639 bytes in 9,375 blocks ==1165607== Reachable blocks (those to which a pointer was found) are not shown. ==1165607== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1165607== ==1165607== For lists of detected and suppressed errors, rerun with: -s ==1165607== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 35 from 35)