==1180081== Memcheck, a memory error detector ==1180081== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1180081== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1180081== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1180081== Parent PID: 1164611 ==1180081== ==1180081== ==1180081== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1180081== Open file descriptor 12: ==1180081== at 0xD29722D: pipe (pipe.c:29) ==1180081== by 0x18A0307D: ??? ==1180081== by 0x140064CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1180081== by 0x107ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180081== by 0x10786D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180081== by 0xF47DD38: PetscInitialize (pinit.c:924) ==1180081== by 0xCB9DFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1180081== by 0xCB9E01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1180081== by 0x12388C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1180081== by 0x11EDA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1180081== by 0x1213C6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1180081== by 0x121266: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1180081== by 0x1218FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1180081== by 0x11D0D5: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1180081== ==1180081== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1180081== at 0xD29BBCC: __open_nocancel (open64_nocancel.c:39) ==1180081== by 0xD21FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1180081== by 0xCBD2822: ??? ==1180081== by 0xCBD296F: ??? ==1180081== by 0x140AB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1180081== by 0x140AB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1180081== by 0x14061922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1180081== by 0x140062DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1180081== by 0x107ED418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180081== by 0x10786D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1180081== by 0xF47DD38: PetscInitialize (pinit.c:924) ==1180081== by 0xCB9DFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1180081== by 0xCB9E01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1180081== by 0x12388C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1180081== by 0x11EDA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1180081== by 0x1213C6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1180081== by 0x121266: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1180081== by 0x1218FD: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1180081== by 0x11D0D5: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==1180081== ==1180081== Open file descriptor 116: ==1180081== ==1180081== ==1180081== Open file descriptor 112: ==1180081== ==1180081== ==1180081== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==1180081== ==1180081== ==1180081== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1180081== ==1180081== ==1180081== ==1180081== HEAP SUMMARY: ==1180081== in use at exit: 700,688 bytes in 9,374 blocks ==1180081== total heap usage: 40,688,642 allocs, 40,679,268 frees, 3,845,554,834 bytes allocated ==1180081== ==1180081== LEAK SUMMARY: ==1180081== definitely lost: 0 bytes in 0 blocks ==1180081== indirectly lost: 0 bytes in 0 blocks ==1180081== possibly lost: 0 bytes in 0 blocks ==1180081== still reachable: 56 bytes in 3 blocks ==1180081== suppressed: 700,632 bytes in 9,371 blocks ==1180081== Reachable blocks (those to which a pointer was found) are not shown. ==1180081== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1180081== ==1180081== For lists of detected and suppressed errors, rerun with: -s ==1180081== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)