==1293838== Memcheck, a memory error detector ==1293838== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1293838== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1293838== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestFibreReaderAbilityExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==1293838== Parent PID: 1277417 ==1293838== ==1293838== ==1293838== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1293838== Open file descriptor 12: ==1293838== at 0xA43B22D: pipe (pipe.c:29) ==1293838== by 0x13F8107D: ??? ==1293838== by 0xF78D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1293838== by 0xBB33418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1293838== by 0xBACCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1293838== by 0xA7C3D38: PetscInitialize (pinit.c:924) ==1293838== by 0x9D27FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1293838== by 0x9D2801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1293838== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1293838== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1293838== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1293838== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1293838== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1293838== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==1293838== ==1293838== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1293838== at 0xA43FBCC: __open_nocancel (open64_nocancel.c:39) ==1293838== by 0xA3C3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1293838== by 0x9D5C822: ??? ==1293838== by 0x9D5C96F: ??? ==1293838== by 0xF8326DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1293838== by 0xF832938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1293838== by 0xF7E8922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1293838== by 0xF78D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1293838== by 0xBB33418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1293838== by 0xBACCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1293838== by 0xA7C3D38: PetscInitialize (pinit.c:924) ==1293838== by 0x9D27FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1293838== by 0x9D2801D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1293838== by 0x128E4C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1293838== by 0x123553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1293838== by 0x126214: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1293838== by 0x12610F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1293838== by 0x126723: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1293838== by 0x121D55: main (TestFibreReaderAbilityExtendedBidomainProblem.cpp:18) ==1293838== ==1293838== Open file descriptor 116: ==1293838== ==1293838== ==1293838== Open file descriptor 112: ==1293838== ==1293838== ==1293838== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestFibreReaderAbilityExtendedBidomainProblem_valgrind.txt ==1293838== ==1293838== ==1293838== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1293838== ==1293838== ==1293838== ==1293838== HEAP SUMMARY: ==1293838== in use at exit: 700,743 bytes in 9,377 blocks ==1293838== total heap usage: 117,999 allocs, 108,622 frees, 1,358,030,636 bytes allocated ==1293838== ==1293838== LEAK SUMMARY: ==1293838== definitely lost: 0 bytes in 0 blocks ==1293838== indirectly lost: 0 bytes in 0 blocks ==1293838== possibly lost: 0 bytes in 0 blocks ==1293838== still reachable: 24 bytes in 2 blocks ==1293838== suppressed: 700,719 bytes in 9,375 blocks ==1293838== Reachable blocks (those to which a pointer was found) are not shown. ==1293838== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1293838== ==1293838== For lists of detected and suppressed errors, rerun with: -s ==1293838== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)