==1278619== Memcheck, a memory error detector ==1278619== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1278619== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1278619== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOdeBasedCellCycleModels -malloc_debug -malloc_dump -memory_info ==1278619== Parent PID: 1277417 ==1278619== ==1278619== ==1278619== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1278619== Open file descriptor 12: ==1278619== at 0xE68F22D: pipe (pipe.c:29) ==1278619== by 0x18A0607D: ??? ==1278619== by 0x12FA74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1278619== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1278619== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1278619== by 0xCF6ED38: PetscInitialize (pinit.c:924) ==1278619== by 0xCDE3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1278619== by 0xCDE401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1278619== by 0x136F49: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1278619== by 0x12FA77: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1278619== by 0x132732: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1278619== by 0x1325D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1278619== by 0x132C69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1278619== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1278619== ==1278619== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1278619== at 0xE693BCC: __open_nocancel (open64_nocancel.c:39) ==1278619== by 0xE617C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1278619== by 0xCE18822: ??? ==1278619== by 0xCE1896F: ??? ==1278619== by 0x1304C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1278619== by 0x1304C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1278619== by 0x13002922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1278619== by 0x12FA72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1278619== by 0xE2DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1278619== by 0xE277D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1278619== by 0xCF6ED38: PetscInitialize (pinit.c:924) ==1278619== by 0xCDE3FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1278619== by 0xCDE401D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1278619== by 0x136F49: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1278619== by 0x12FA77: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1278619== by 0x132732: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1278619== by 0x1325D2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1278619== by 0x132C69: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1278619== by 0x12B8A5: main (TestOdeBasedCellCycleModels.cpp:19) ==1278619== ==1278619== Open file descriptor 116: ==1278619== ==1278619== ==1278619== Open file descriptor 112: ==1278619== ==1278619== ==1278619== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModels_valgrind.txt ==1278619== ==1278619== ==1278619== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1278619== ==1278619== ==1278619== ==1278619== HEAP SUMMARY: ==1278619== in use at exit: 700,704 bytes in 9,375 blocks ==1278619== total heap usage: 4,181,059 allocs, 4,171,684 frees, 1,785,111,896 bytes allocated ==1278619== ==1278619== LEAK SUMMARY: ==1278619== definitely lost: 0 bytes in 0 blocks ==1278619== indirectly lost: 0 bytes in 0 blocks ==1278619== possibly lost: 0 bytes in 0 blocks ==1278619== still reachable: 72 bytes in 4 blocks ==1278619== suppressed: 700,632 bytes in 9,371 blocks ==1278619== Reachable blocks (those to which a pointer was found) are not shown. ==1278619== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1278619== ==1278619== For lists of detected and suppressed errors, rerun with: -s ==1278619== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)