==1279393== Memcheck, a memory error detector ==1279393== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1279393== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1279393== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation3d -malloc_debug -malloc_dump -memory_info ==1279393== Parent PID: 1277417 ==1279393== ==1279393== ==1279393== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1279393== Open file descriptor 12: ==1279393== at 0x1013022D: pipe (pipe.c:29) ==1279393== by 0x18A0507D: ??? ==1279393== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1279393== by 0xF953418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1279393== by 0xF8ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1279393== by 0xE5E3D38: PetscInitialize (pinit.c:924) ==1279393== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1279393== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1279393== by 0x1FF501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1279393== by 0x1F9477: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1279393== by 0x1FC78C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1279393== by 0x1FC688: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1279393== by 0x1FCC9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1279393== by 0x1F7C35: main (TestOffLatticeSimulation3d.cpp:18) ==1279393== ==1279393== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1279393== at 0x10134BCC: __open_nocancel (open64_nocancel.c:39) ==1279393== by 0x100B8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1279393== by 0xE48D822: ??? ==1279393== by 0xE48D96F: ??? ==1279393== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1279393== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1279393== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1279393== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1279393== by 0xF953418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1279393== by 0xF8ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1279393== by 0xE5E3D38: PetscInitialize (pinit.c:924) ==1279393== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1279393== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1279393== by 0x1FF501: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1279393== by 0x1F9477: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1279393== by 0x1FC78C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1279393== by 0x1FC688: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1279393== by 0x1FCC9B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1279393== by 0x1F7C35: main (TestOffLatticeSimulation3d.cpp:18) ==1279393== ==1279393== Open file descriptor 116: ==1279393== ==1279393== ==1279393== Open file descriptor 112: ==1279393== ==1279393== ==1279393== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation3d_valgrind.txt ==1279393== ==1279393== ==1279393== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1279393== ==1279393== ==1279393== ==1279393== HEAP SUMMARY: ==1279393== in use at exit: 700,759 bytes in 9,378 blocks ==1279393== total heap usage: 856,186 allocs, 846,808 frees, 1,519,104,074 bytes allocated ==1279393== ==1279393== LEAK SUMMARY: ==1279393== definitely lost: 0 bytes in 0 blocks ==1279393== indirectly lost: 0 bytes in 0 blocks ==1279393== possibly lost: 0 bytes in 0 blocks ==1279393== still reachable: 56 bytes in 3 blocks ==1279393== suppressed: 700,703 bytes in 9,375 blocks ==1279393== Reachable blocks (those to which a pointer was found) are not shown. ==1279393== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1279393== ==1279393== For lists of detected and suppressed errors, rerun with: -s ==1279393== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)