==1338532== Memcheck, a memory error detector ==1338532== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1338532== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1338532== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1338532== Parent PID: 1336167 ==1338532== ==1338532== ==1338532== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1338532== Open file descriptor 12: ==1338532== at 0x1013022D: pipe (pipe.c:29) ==1338532== by 0x18A0507D: ??? ==1338532== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1338532== by 0xF953418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1338532== by 0xF8ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1338532== by 0xE5E3D38: PetscInitialize (pinit.c:924) ==1338532== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1338532== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1338532== by 0x20003B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1338532== by 0x1F9C09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1338532== by 0x1FD574: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1338532== by 0x1FD414: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1338532== by 0x1FDAAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1338532== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==1338532== ==1338532== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1338532== at 0x10134BCC: __open_nocancel (open64_nocancel.c:39) ==1338532== by 0x100B8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1338532== by 0xE48D822: ??? ==1338532== by 0xE48D96F: ??? ==1338532== by 0x1400F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1338532== by 0x1400F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1338532== by 0x13FC5922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1338532== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1338532== by 0xF953418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1338532== by 0xF8ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1338532== by 0xE5E3D38: PetscInitialize (pinit.c:924) ==1338532== by 0xE458FCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1338532== by 0xE45901D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1338532== by 0x20003B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1338532== by 0x1F9C09: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1338532== by 0x1FD574: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1338532== by 0x1FD414: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1338532== by 0x1FDAAB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1338532== by 0x1F7EF5: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==1338532== ==1338532== Open file descriptor 116: ==1338532== ==1338532== ==1338532== Open file descriptor 112: ==1338532== ==1338532== ==1338532== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==1338532== ==1338532== ==1338532== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1338532== ==1338532== ==1338532== ==1338532== HEAP SUMMARY: ==1338532== in use at exit: 700,688 bytes in 9,374 blocks ==1338532== total heap usage: 9,749,310 allocs, 9,739,936 frees, 2,617,606,777 bytes allocated ==1338532== ==1338532== LEAK SUMMARY: ==1338532== definitely lost: 0 bytes in 0 blocks ==1338532== indirectly lost: 0 bytes in 0 blocks ==1338532== possibly lost: 0 bytes in 0 blocks ==1338532== still reachable: 56 bytes in 3 blocks ==1338532== suppressed: 700,632 bytes in 9,371 blocks ==1338532== Reachable blocks (those to which a pointer was found) are not shown. ==1338532== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1338532== ==1338532== For lists of detected and suppressed errors, rerun with: -s ==1338532== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)