==1376613== Memcheck, a memory error detector ==1376613== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1376613== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1376613== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestAbstractFunctionalCalculator -malloc_debug -malloc_dump -memory_info ==1376613== Parent PID: 1375558 ==1376613== ==1376613== ==1376613== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1376613== Open file descriptor 12: ==1376613== at 0x856C22D: pipe (pipe.c:29) ==1376613== by 0x104B407D: ??? ==1376613== by 0xBDFC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1376613== by 0x7D8F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1376613== by 0x7D28D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1376613== by 0x69FFD38: PetscInitialize (pinit.c:924) ==1376613== by 0x68D615B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1376613== by 0x68D61A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1376613== by 0x12BA4E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1376613== by 0x126C75: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1376613== by 0x1295C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1376613== by 0x129464: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1376613== by 0x129AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1376613== by 0x124F55: main (TestAbstractFunctionalCalculator.cpp:19) ==1376613== ==1376613== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1376613== at 0x8570BCC: __open_nocancel (open64_nocancel.c:39) ==1376613== by 0x84F4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1376613== by 0x7C89822: ??? ==1376613== by 0x7C8996F: ??? ==1376613== by 0xBEA16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1376613== by 0xBEA1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1376613== by 0xBE57922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1376613== by 0xBDFC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1376613== by 0x7D8F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1376613== by 0x7D28D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1376613== by 0x69FFD38: PetscInitialize (pinit.c:924) ==1376613== by 0x68D615B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1376613== by 0x68D61A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1376613== by 0x12BA4E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1376613== by 0x126C75: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1376613== by 0x1295C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1376613== by 0x129464: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1376613== by 0x129AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1376613== by 0x124F55: main (TestAbstractFunctionalCalculator.cpp:19) ==1376613== ==1376613== Open file descriptor 116: ==1376613== ==1376613== ==1376613== Open file descriptor 112: ==1376613== ==1376613== ==1376613== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractFunctionalCalculator_valgrind.txt ==1376613== ==1376613== ==1376613== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1376613== ==1376613== ==1376613== ==1376613== HEAP SUMMARY: ==1376613== in use at exit: 706,935 bytes in 9,489 blocks ==1376613== total heap usage: 92,235 allocs, 82,746 frees, 1,355,648,809 bytes allocated ==1376613== ==1376613== 448 bytes in 8 blocks are definitely lost in loss record 51 of 76 ==1376613== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1376613== by 0x5AED095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1376613== by 0x5AEB32E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1376613== by 0x5AEE2D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1376613== by 0x5AEE2F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1376613== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1376613== by 0x4006567: call_init (dl-init.c:33) ==1376613== by 0x4006567: _dl_init (dl-init.c:117) ==1376613== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1376613== by 0x3: ??? ==1376613== by 0x1FFF0002F2: ??? ==1376613== by 0x1FFF000364: ??? ==1376613== by 0x1FFF000372: ??? ==1376613== by 0x1FFF00037F: ??? ==1376613== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1376613== LEAK SUMMARY: ==1376613== definitely lost: 448 bytes in 8 blocks ==1376613== indirectly lost: 0 bytes in 0 blocks ==1376613== possibly lost: 0 bytes in 0 blocks ==1376613== still reachable: 5,848 bytes in 106 blocks ==1376613== suppressed: 700,639 bytes in 9,375 blocks ==1376613== Reachable blocks (those to which a pointer was found) are not shown. ==1376613== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1376613== ==1376613== For lists of detected and suppressed errors, rerun with: -s ==1376613== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 34 from 34)