==1391907== Memcheck, a memory error detector ==1391907== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1391907== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1391907== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/lung/test/TestAirwayRemesher -malloc_debug -malloc_dump -memory_info ==1391907== Parent PID: 1375558 ==1391907== ==1391907== ==1391907== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1391907== Open file descriptor 12: ==1391907== at 0x820722D: pipe (pipe.c:29) ==1391907== by 0x1078407D: ??? ==1391907== by 0xBFA84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1391907== by 0x7B11418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391907== by 0x7AAAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391907== by 0x6781D38: PetscInitialize (pinit.c:924) ==1391907== by 0x665815B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1391907== by 0x66581A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1391907== by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1391907== by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1391907== by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1391907== by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1391907== by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1391907== by 0x114955: main (TestAirwayRemesher.cpp:18) ==1391907== ==1391907== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1391907== at 0x820BBCC: __open_nocancel (open64_nocancel.c:39) ==1391907== by 0x818FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1391907== by 0x7A0B822: ??? ==1391907== by 0x7A0B96F: ??? ==1391907== by 0xC04D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391907== by 0xC04D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391907== by 0xC003922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391907== by 0xBFA82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1391907== by 0x7B11418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391907== by 0x7AAAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391907== by 0x6781D38: PetscInitialize (pinit.c:924) ==1391907== by 0x665815B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1391907== by 0x66581A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1391907== by 0x11A567: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1391907== by 0x116153: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1391907== by 0x1185EC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1391907== by 0x1184E7: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1391907== by 0x118AFB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1391907== by 0x114955: main (TestAirwayRemesher.cpp:18) ==1391907== ==1391907== Open file descriptor 116: ==1391907== ==1391907== ==1391907== Open file descriptor 112: ==1391907== ==1391907== ==1391907== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAirwayRemesher_valgrind.txt ==1391907== ==1391907== ==1391907== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1391907== ==1391907== ==1391907== ==1391907== HEAP SUMMARY: ==1391907== in use at exit: 706,928 bytes in 9,485 blocks ==1391907== total heap usage: 11,599,358 allocs, 11,589,873 frees, 1,812,603,971 bytes allocated ==1391907== ==1391907== 448 bytes in 8 blocks are definitely lost in loss record 49 of 74 ==1391907== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1391907== by 0x586F095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1391907== by 0x586D32E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1391907== by 0x58702D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1391907== by 0x58702F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1391907== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1391907== by 0x4006567: call_init (dl-init.c:33) ==1391907== by 0x4006567: _dl_init (dl-init.c:117) ==1391907== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1391907== by 0x3: ??? ==1391907== by 0x1FFF00030E: ??? ==1391907== by 0x1FFF000373: ??? ==1391907== by 0x1FFF000381: ??? ==1391907== by 0x1FFF00038E: ??? ==1391907== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1391907== LEAK SUMMARY: ==1391907== definitely lost: 448 bytes in 8 blocks ==1391907== indirectly lost: 0 bytes in 0 blocks ==1391907== possibly lost: 0 bytes in 0 blocks ==1391907== still reachable: 5,848 bytes in 106 blocks ==1391907== suppressed: 700,632 bytes in 9,371 blocks ==1391907== Reachable blocks (those to which a pointer was found) are not shown. ==1391907== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1391907== ==1391907== For lists of detected and suppressed errors, rerun with: -s ==1391907== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 32 from 32)