==1391215== Memcheck, a memory error detector ==1391215== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1391215== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1391215== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptCellsGenerator -malloc_debug -malloc_dump -memory_info ==1391215== Parent PID: 1375558 ==1391215== ==1391215== ==1391215== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1391215== Open file descriptor 12: ==1391215== at 0x1263D22D: pipe (pipe.c:29) ==1391215== by 0x1B43C07D: ??? ==1391215== by 0x165A04CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1391215== by 0x11F47418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391215== by 0x11EE0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391215== by 0x10BB7D38: PetscInitialize (pinit.c:924) ==1391215== by 0x10A8E15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1391215== by 0x10A8E1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1391215== by 0x12123F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1391215== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1391215== by 0x11ED26: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1391215== by 0x11EC21: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1391215== by 0x11F235: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1391215== by 0x11AE75: main (TestCryptCellsGenerator.cpp:18) ==1391215== ==1391215== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1391215== at 0x12641BCC: __open_nocancel (open64_nocancel.c:39) ==1391215== by 0x125C5C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1391215== by 0x11E41822: ??? ==1391215== by 0x11E4196F: ??? ==1391215== by 0x166456DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391215== by 0x16645938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391215== by 0x165FB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1391215== by 0x165A02DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1391215== by 0x11F47418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391215== by 0x11EE0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1391215== by 0x10BB7D38: PetscInitialize (pinit.c:924) ==1391215== by 0x10A8E15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1391215== by 0x10A8E1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1391215== by 0x12123F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1391215== by 0x11C673: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1391215== by 0x11ED26: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1391215== by 0x11EC21: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1391215== by 0x11F235: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1391215== by 0x11AE75: main (TestCryptCellsGenerator.cpp:18) ==1391215== ==1391215== Open file descriptor 116: ==1391215== ==1391215== ==1391215== Open file descriptor 112: ==1391215== ==1391215== ==1391215== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptCellsGenerator_valgrind.txt ==1391215== ==1391215== ==1391215== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1391215== ==1391215== ==1391215== ==1391215== HEAP SUMMARY: ==1391215== in use at exit: 707,175 bytes in 9,491 blocks ==1391215== total heap usage: 89,659 allocs, 80,168 frees, 1,357,384,085 bytes allocated ==1391215== ==1391215== 448 bytes in 8 blocks are definitely lost in loss record 53 of 81 ==1391215== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1391215== by 0xFCA7095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1391215== by 0xFCA532E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1391215== by 0xFCA82D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1391215== by 0xFCA82F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1391215== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1391215== by 0x4006567: call_init (dl-init.c:33) ==1391215== by 0x4006567: _dl_init (dl-init.c:117) ==1391215== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1391215== by 0x3: ??? ==1391215== by 0x1FFF000302: ??? ==1391215== by 0x1FFF00036D: ??? ==1391215== by 0x1FFF00037B: ??? ==1391215== by 0x1FFF000388: ??? ==1391215== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1391215== LEAK SUMMARY: ==1391215== definitely lost: 448 bytes in 8 blocks ==1391215== indirectly lost: 0 bytes in 0 blocks ==1391215== possibly lost: 0 bytes in 0 blocks ==1391215== still reachable: 6,008 bytes in 108 blocks ==1391215== suppressed: 700,719 bytes in 9,375 blocks ==1391215== Reachable blocks (those to which a pointer was found) are not shown. ==1391215== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1391215== ==1391215== For lists of detected and suppressed errors, rerun with: -s ==1391215== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 37 from 37)