==1436645== Memcheck, a memory error detector ==1436645== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1436645== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1436645== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCardiacElectroMechanicsProblem -malloc_debug -malloc_dump -memory_info ==1436645== Parent PID: 1419039 ==1436645== ==1436645== ==1436645== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1436645== Open file descriptor 12: ==1436645== at 0xABD722D: pipe (pipe.c:29) ==1436645== by 0x1430A07D: ??? ==1436645== by 0xD9054CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1436645== by 0xA3E0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436645== by 0xA379D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436645== by 0xADDFD38: PetscInitialize (pinit.c:924) ==1436645== by 0xA2A315B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1436645== by 0xA2A31A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1436645== by 0x13355A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1436645== by 0x12C3A5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1436645== by 0x12F76A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1436645== by 0x12F60A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1436645== by 0x12FCA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1436645== by 0x12A6D5: main (TestCardiacElectroMechanicsProblem.cpp:19) ==1436645== ==1436645== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1436645== at 0xABDBBCC: __open_nocancel (open64_nocancel.c:39) ==1436645== by 0xAB5FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1436645== by 0xA2D8822: ??? ==1436645== by 0xA2D896F: ??? ==1436645== by 0xD9AA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1436645== by 0xD9AA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1436645== by 0xD960922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1436645== by 0xD9052DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1436645== by 0xA3E0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436645== by 0xA379D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1436645== by 0xADDFD38: PetscInitialize (pinit.c:924) ==1436645== by 0xA2A315B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1436645== by 0xA2A31A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1436645== by 0x13355A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1436645== by 0x12C3A5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1436645== by 0x12F76A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1436645== by 0x12F60A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1436645== by 0x12FCA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1436645== by 0x12A6D5: main (TestCardiacElectroMechanicsProblem.cpp:19) ==1436645== ==1436645== Open file descriptor 116: ==1436645== ==1436645== ==1436645== Open file descriptor 112: ==1436645== ==1436645== ==1436645== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCardiacElectroMechanicsProblem_valgrind.txt ==1436645== ==1436645== ==1436645== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1436645== ==1436645== ==1436645== ==1436645== HEAP SUMMARY: ==1436645== in use at exit: 707,495 bytes in 9,499 blocks ==1436645== total heap usage: 579,656 allocs, 570,157 frees, 1,497,588,643 bytes allocated ==1436645== ==1436645== 448 bytes in 8 blocks are definitely lost in loss record 55 of 83 ==1436645== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1436645== by 0x93B8095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1436645== by 0x93B632E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1436645== by 0x93B92D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1436645== by 0x93B92F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1436645== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1436645== by 0x4006567: call_init (dl-init.c:33) ==1436645== by 0x4006567: _dl_init (dl-init.c:117) ==1436645== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1436645== by 0x3: ??? ==1436645== by 0x1FFF0002E2: ??? ==1436645== by 0x1FFF000358: ??? ==1436645== by 0x1FFF000366: ??? ==1436645== by 0x1FFF000373: ??? ==1436645== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1436645== LEAK SUMMARY: ==1436645== definitely lost: 448 bytes in 8 blocks ==1436645== indirectly lost: 0 bytes in 0 blocks ==1436645== possibly lost: 0 bytes in 0 blocks ==1436645== still reachable: 5,848 bytes in 106 blocks ==1436645== suppressed: 701,199 bytes in 9,385 blocks ==1436645== Reachable blocks (those to which a pointer was found) are not shown. ==1436645== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1436645== ==1436645== For lists of detected and suppressed errors, rerun with: -s ==1436645== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 79 from 38)