==1434678== Memcheck, a memory error detector ==1434678== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1434678== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1434678== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==1434678== Parent PID: 1419039 ==1434678== ==1434678== ==1434678== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1434678== Open file descriptor 12: ==1434678== at 0xF54822D: pipe (pipe.c:29) ==1434678== by 0x1B44107D: ??? ==1434678== by 0x166414CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1434678== by 0x12F0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1434678== by 0x12EA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1434678== by 0x11B9ED38: PetscInitialize (pinit.c:924) ==1434678== by 0xEE5015B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1434678== by 0xEE501A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1434678== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1434678== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1434678== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1434678== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1434678== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1434678== by 0x118975: main (TestCellForCrypt.cpp:18) ==1434678== ==1434678== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1434678== at 0xF54CBCC: __open_nocancel (open64_nocancel.c:39) ==1434678== by 0xF4D0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1434678== by 0xEE85822: ??? ==1434678== by 0xEE8596F: ??? ==1434678== by 0x166E66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1434678== by 0x166E6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1434678== by 0x1669C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1434678== by 0x166412DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1434678== by 0x12F0E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1434678== by 0x12EA7D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1434678== by 0x11B9ED38: PetscInitialize (pinit.c:924) ==1434678== by 0xEE5015B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1434678== by 0xEE501A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1434678== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1434678== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1434678== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1434678== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1434678== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1434678== by 0x118975: main (TestCellForCrypt.cpp:18) ==1434678== ==1434678== Open file descriptor 116: ==1434678== ==1434678== ==1434678== Open file descriptor 112: ==1434678== ==1434678== ==1434678== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==1434678== ==1434678== ==1434678== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1434678== ==1434678== ==1434678== ==1434678== HEAP SUMMARY: ==1434678== in use at exit: 707,175 bytes in 9,491 blocks ==1434678== total heap usage: 58,117 allocs, 48,626 frees, 1,354,284,799 bytes allocated ==1434678== ==1434678== 448 bytes in 8 blocks are definitely lost in loss record 56 of 81 ==1434678== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1434678== by 0x10796095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1434678== by 0x1079432E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1434678== by 0x107972D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1434678== by 0x107972F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1434678== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1434678== by 0x4006567: call_init (dl-init.c:33) ==1434678== by 0x4006567: _dl_init (dl-init.c:117) ==1434678== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1434678== by 0x3: ??? ==1434678== by 0x1FFF000306: ??? ==1434678== by 0x1FFF00036A: ??? ==1434678== by 0x1FFF000378: ??? ==1434678== by 0x1FFF000385: ??? ==1434678== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1434678== LEAK SUMMARY: ==1434678== definitely lost: 448 bytes in 8 blocks ==1434678== indirectly lost: 0 bytes in 0 blocks ==1434678== possibly lost: 0 bytes in 0 blocks ==1434678== still reachable: 6,008 bytes in 108 blocks ==1434678== suppressed: 700,719 bytes in 9,375 blocks ==1434678== Reachable blocks (those to which a pointer was found) are not shown. ==1434678== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1434678== ==1434678== For lists of detected and suppressed errors, rerun with: -s ==1434678== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 40 from 40)