==1435631== Memcheck, a memory error detector ==1435631== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1435631== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1435631== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestCvodeCells -malloc_debug -malloc_dump -memory_info ==1435631== Parent PID: 1419039 ==1435631== ==1435631== ==1435631== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1435631== Open file descriptor 12: ==1435631== at 0x9D1A22D: pipe (pipe.c:29) ==1435631== by 0x1430B07D: ??? ==1435631== by 0xEE014CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1435631== by 0x994F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1435631== by 0x98E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1435631== by 0x85DFD38: PetscInitialize (pinit.c:924) ==1435631== by 0x845415B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1435631== by 0x84541A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1435631== by 0x136C31: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1435631== by 0x1313BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1435631== by 0x1340B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1435631== by 0x133F54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1435631== by 0x1345EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1435631== by 0x12BB65: main (TestCvodeCells.cpp:19) ==1435631== ==1435631== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1435631== at 0x9D1EBCC: __open_nocancel (open64_nocancel.c:39) ==1435631== by 0x9CA2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1435631== by 0x8489822: ??? ==1435631== by 0x848996F: ??? ==1435631== by 0xEEA86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1435631== by 0xEEA8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1435631== by 0xEE5E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1435631== by 0xEE012DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1435631== by 0x994F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1435631== by 0x98E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1435631== by 0x85DFD38: PetscInitialize (pinit.c:924) ==1435631== by 0x845415B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1435631== by 0x84541A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1435631== by 0x136C31: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1435631== by 0x1313BD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1435631== by 0x1340B4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1435631== by 0x133F54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1435631== by 0x1345EB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1435631== by 0x12BB65: main (TestCvodeCells.cpp:19) ==1435631== ==1435631== Open file descriptor 116: ==1435631== ==1435631== ==1435631== Open file descriptor 112: ==1435631== ==1435631== ==1435631== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCvodeCells_valgrind.txt ==1435631== ==1435631== ==1435631== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1435631== ==1435631== ==1435631== ==1435631== HEAP SUMMARY: ==1435631== in use at exit: 708,763 bytes in 9,489 blocks ==1435631== total heap usage: 233,297 allocs, 223,808 frees, 1,379,030,258 bytes allocated ==1435631== ==1435631== 448 bytes in 8 blocks are definitely lost in loss record 51 of 77 ==1435631== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1435631== by 0xB6CD095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1435631== by 0xB6CB32E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1435631== by 0xB6CE2D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1435631== by 0xB6CE2F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1435631== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1435631== by 0x4006567: call_init (dl-init.c:33) ==1435631== by 0x4006567: _dl_init (dl-init.c:117) ==1435631== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1435631== by 0x3: ??? ==1435631== by 0x1FFF00030A: ??? ==1435631== by 0x1FFF00036C: ??? ==1435631== by 0x1FFF00037A: ??? ==1435631== by 0x1FFF000387: ??? ==1435631== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1435631== LEAK SUMMARY: ==1435631== definitely lost: 448 bytes in 8 blocks ==1435631== indirectly lost: 0 bytes in 0 blocks ==1435631== possibly lost: 0 bytes in 0 blocks ==1435631== still reachable: 7,667 bytes in 110 blocks ==1435631== suppressed: 700,648 bytes in 9,371 blocks ==1435631== Reachable blocks (those to which a pointer was found) are not shown. ==1435631== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1435631== ==1435631== For lists of detected and suppressed errors, rerun with: -s ==1435631== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 31 from 31)