==1437178== Memcheck, a memory error detector ==1437178== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1437178== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1437178== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestMonodomainStiffnessMatrixAssembler -malloc_debug -malloc_dump -memory_info ==1437178== Parent PID: 1419039 ==1437178== ==1437178== ==1437178== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1437178== Open file descriptor 12: ==1437178== at 0xBFC522D: pipe (pipe.c:29) ==1437178== by 0x1430D07D: ??? ==1437178== by 0xFB0F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1437178== by 0xC341418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437178== by 0xC2DAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437178== by 0xA575D38: PetscInitialize (pinit.c:924) ==1437178== by 0xA44C15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1437178== by 0xA44C1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1437178== by 0x13BAB8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1437178== by 0x136833: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1437178== by 0x1393DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1437178== by 0x1392D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1437178== by 0x1398E9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1437178== by 0x135035: main (TestMonodomainStiffnessMatrixAssembler.cpp:18) ==1437178== ==1437178== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1437178== at 0xBFC9BCC: __open_nocancel (open64_nocancel.c:39) ==1437178== by 0xBF4DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1437178== by 0xB7FF822: ??? ==1437178== by 0xB7FF96F: ??? ==1437178== by 0xFBB46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1437178== by 0xFBB4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1437178== by 0xFB6A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1437178== by 0xFB0F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1437178== by 0xC341418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437178== by 0xC2DAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1437178== by 0xA575D38: PetscInitialize (pinit.c:924) ==1437178== by 0xA44C15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1437178== by 0xA44C1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1437178== by 0x13BAB8: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1437178== by 0x136833: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1437178== by 0x1393DA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1437178== by 0x1392D5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1437178== by 0x1398E9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1437178== by 0x135035: main (TestMonodomainStiffnessMatrixAssembler.cpp:18) ==1437178== ==1437178== Open file descriptor 116: ==1437178== ==1437178== ==1437178== Open file descriptor 112: ==1437178== ==1437178== ==1437178== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMonodomainStiffnessMatrixAssembler_valgrind.txt ==1437178== ==1437178== ==1437178== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1437178== ==1437178== ==1437178== ==1437178== HEAP SUMMARY: ==1437178== in use at exit: 707,015 bytes in 9,489 blocks ==1437178== total heap usage: 51,934 allocs, 42,445 frees, 1,353,720,477 bytes allocated ==1437178== ==1437178== 448 bytes in 8 blocks are definitely lost in loss record 51 of 76 ==1437178== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1437178== by 0x95D4095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1437178== by 0x95D232E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1437178== by 0x95D52D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1437178== by 0x95D52F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1437178== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1437178== by 0x4006567: call_init (dl-init.c:33) ==1437178== by 0x4006567: _dl_init (dl-init.c:117) ==1437178== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1437178== by 0x3: ??? ==1437178== by 0x1FFF0002DA: ??? ==1437178== by 0x1FFF000354: ??? ==1437178== by 0x1FFF000362: ??? ==1437178== by 0x1FFF00036F: ??? ==1437178== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1437178== LEAK SUMMARY: ==1437178== definitely lost: 448 bytes in 8 blocks ==1437178== indirectly lost: 0 bytes in 0 blocks ==1437178== possibly lost: 0 bytes in 0 blocks ==1437178== still reachable: 5,848 bytes in 106 blocks ==1437178== suppressed: 700,719 bytes in 9,375 blocks ==1437178== Reachable blocks (those to which a pointer was found) are not shown. ==1437178== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1437178== ==1437178== For lists of detected and suppressed errors, rerun with: -s ==1437178== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 34 from 34)