==1458114== Memcheck, a memory error detector ==1458114== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1458114== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1458114== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestGmshMeshReader -malloc_debug -malloc_dump -memory_info ==1458114== Parent PID: 1457562 ==1458114== ==1458114== ==1458114== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1458114== Open file descriptor 12: ==1458114== at 0x6D1C22D: pipe (pipe.c:29) ==1458114== by 0x100A607D: ??? ==1458114== by 0xBA2E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1458114== by 0x8367418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1458114== by 0x8300D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1458114== by 0x6FF7D38: PetscInitialize (pinit.c:924) ==1458114== by 0x653B15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1458114== by 0x653B1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1458114== by 0x1236F6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1458114== by 0x11EB25: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1458114== by 0x121642: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1458114== by 0x1214E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1458114== by 0x121B79: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1458114== by 0x11CE55: main (TestGmshMeshReader.cpp:19) ==1458114== ==1458114== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1458114== at 0x6D20BCC: __open_nocancel (open64_nocancel.c:39) ==1458114== by 0x6CA4C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1458114== by 0x6570822: ??? ==1458114== by 0x657096F: ??? ==1458114== by 0xBAD36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1458114== by 0xBAD3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1458114== by 0xBA89922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1458114== by 0xBA2E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1458114== by 0x8367418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1458114== by 0x8300D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1458114== by 0x6FF7D38: PetscInitialize (pinit.c:924) ==1458114== by 0x653B15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1458114== by 0x653B1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1458114== by 0x1236F6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1458114== by 0x11EB25: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1458114== by 0x121642: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1458114== by 0x1214E2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1458114== by 0x121B79: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1458114== by 0x11CE55: main (TestGmshMeshReader.cpp:19) ==1458114== ==1458114== Open file descriptor 116: ==1458114== ==1458114== ==1458114== Open file descriptor 112: ==1458114== ==1458114== ==1458114== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGmshMeshReader_valgrind.txt ==1458114== ==1458114== ==1458114== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1458114== ==1458114== ==1458114== ==1458114== HEAP SUMMARY: ==1458114== in use at exit: 706,903 bytes in 9,489 blocks ==1458114== total heap usage: 52,997 allocs, 43,508 frees, 1,354,437,553 bytes allocated ==1458114== ==1458114== 448 bytes in 8 blocks are definitely lost in loss record 52 of 77 ==1458114== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1458114== by 0x5751095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1458114== by 0x574F32E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1458114== by 0x57522D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1458114== by 0x57522F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1458114== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1458114== by 0x4006567: call_init (dl-init.c:33) ==1458114== by 0x4006567: _dl_init (dl-init.c:117) ==1458114== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1458114== by 0x3: ??? ==1458114== by 0x1FFF000302: ??? ==1458114== by 0x1FFF000367: ??? ==1458114== by 0x1FFF000375: ??? ==1458114== by 0x1FFF000382: ??? ==1458114== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1458114== LEAK SUMMARY: ==1458114== definitely lost: 448 bytes in 8 blocks ==1458114== indirectly lost: 0 bytes in 0 blocks ==1458114== possibly lost: 0 bytes in 0 blocks ==1458114== still reachable: 5,848 bytes in 106 blocks ==1458114== suppressed: 700,607 bytes in 9,375 blocks ==1458114== Reachable blocks (those to which a pointer was found) are not shown. ==1458114== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1458114== ==1458114== For lists of detected and suppressed errors, rerun with: -s ==1458114== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 35 from 35)