==1475876== Memcheck, a memory error detector ==1475876== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1475876== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1475876== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestStimulusBoundaryCondition -malloc_debug -malloc_dump -memory_info ==1475876== Parent PID: 1457562 ==1475876== ==1475876== ==1475876== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1475876== Open file descriptor 12: ==1475876== at 0xA54822D: pipe (pipe.c:29) ==1475876== by 0x1430B07D: ??? ==1475876== by 0xFAC24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1475876== by 0xBC42418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1475876== by 0xBBDBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1475876== by 0xA8D2D38: PetscInitialize (pinit.c:924) ==1475876== by 0xA17B15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1475876== by 0xA17B1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1475876== by 0x111E4E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1475876== by 0x10DC13: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1475876== by 0x10FF02: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1475876== by 0x10FDFD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1475876== by 0x110411: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1475876== by 0x10C415: main (TestStimulusBoundaryCondition.cpp:18) ==1475876== ==1475876== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1475876== at 0xA54CBCC: __open_nocancel (open64_nocancel.c:39) ==1475876== by 0xA4D0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1475876== by 0xA1B0822: ??? ==1475876== by 0xA1B096F: ??? ==1475876== by 0xFB676DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1475876== by 0xFB67938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1475876== by 0xFB1D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1475876== by 0xFAC22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1475876== by 0xBC42418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1475876== by 0xBBDBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1475876== by 0xA8D2D38: PetscInitialize (pinit.c:924) ==1475876== by 0xA17B15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1475876== by 0xA17B1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1475876== by 0x111E4E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1475876== by 0x10DC13: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1475876== by 0x10FF02: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1475876== by 0x10FDFD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1475876== by 0x110411: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1475876== by 0x10C415: main (TestStimulusBoundaryCondition.cpp:18) ==1475876== ==1475876== Open file descriptor 116: ==1475876== ==1475876== ==1475876== Open file descriptor 112: ==1475876== ==1475876== ==1475876== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStimulusBoundaryCondition_valgrind.txt ==1475876== ==1475876== ==1475876== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1475876== ==1475876== ==1475876== ==1475876== HEAP SUMMARY: ==1475876== in use at exit: 707,015 bytes in 9,489 blocks ==1475876== total heap usage: 51,102 allocs, 41,613 frees, 1,353,602,232 bytes allocated ==1475876== ==1475876== 448 bytes in 8 blocks are definitely lost in loss record 51 of 79 ==1475876== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1475876== by 0x9391095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1475876== by 0x938F32E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1475876== by 0x93922D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1475876== by 0x93922F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1475876== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1475876== by 0x4006567: call_init (dl-init.c:33) ==1475876== by 0x4006567: _dl_init (dl-init.c:117) ==1475876== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1475876== by 0x3: ??? ==1475876== by 0x1FFF0002EA: ??? ==1475876== by 0x1FFF00035B: ??? ==1475876== by 0x1FFF000369: ??? ==1475876== by 0x1FFF000376: ??? ==1475876== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1475876== LEAK SUMMARY: ==1475876== definitely lost: 448 bytes in 8 blocks ==1475876== indirectly lost: 0 bytes in 0 blocks ==1475876== possibly lost: 0 bytes in 0 blocks ==1475876== still reachable: 5,848 bytes in 106 blocks ==1475876== suppressed: 700,719 bytes in 9,375 blocks ==1475876== Reachable blocks (those to which a pointer was found) are not shown. ==1475876== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1475876== ==1475876== For lists of detected and suppressed errors, rerun with: -s ==1475876== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 37 from 37)