==1474135== Memcheck, a memory error detector ==1474135== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1474135== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1474135== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestStreeterFibreGenerator -malloc_debug -malloc_dump -memory_info ==1474135== Parent PID: 1457562 ==1474135== ==1474135== ==1474135== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1474135== Open file descriptor 12: ==1474135== at 0xB9A822D: pipe (pipe.c:29) ==1474135== by 0x1430C07D: ??? ==1474135== by 0xFAC34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1474135== by 0xB298418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1474135== by 0xB231D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1474135== by 0x9F08D38: PetscInitialize (pinit.c:924) ==1474135== by 0x9DDF15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1474135== by 0x9DDF1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1474135== by 0x11B5A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1474135== by 0x116965: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1474135== by 0x1193F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1474135== by 0x119294: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1474135== by 0x11992B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1474135== by 0x114C95: main (TestStreeterFibreGenerator.cpp:19) ==1474135== ==1474135== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1474135== at 0xB9ACBCC: __open_nocancel (open64_nocancel.c:39) ==1474135== by 0xB930C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1474135== by 0xB192822: ??? ==1474135== by 0xB19296F: ??? ==1474135== by 0xFB686DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1474135== by 0xFB68938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1474135== by 0xFB1E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1474135== by 0xFAC32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1474135== by 0xB298418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1474135== by 0xB231D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1474135== by 0x9F08D38: PetscInitialize (pinit.c:924) ==1474135== by 0x9DDF15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1474135== by 0x9DDF1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1474135== by 0x11B5A0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1474135== by 0x116965: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1474135== by 0x1193F4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1474135== by 0x119294: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1474135== by 0x11992B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1474135== by 0x114C95: main (TestStreeterFibreGenerator.cpp:19) ==1474135== ==1474135== Open file descriptor 116: ==1474135== ==1474135== ==1474135== Open file descriptor 112: ==1474135== ==1474135== ==1474135== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestStreeterFibreGenerator_valgrind.txt ==1474135== ==1474135== ==1474135== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1474135== ==1474135== ==1474135== ==1474135== HEAP SUMMARY: ==1474135== in use at exit: 706,944 bytes in 9,485 blocks ==1474135== total heap usage: 4,492,412 allocs, 4,482,927 frees, 1,590,877,972 bytes allocated ==1474135== ==1474135== 448 bytes in 8 blocks are definitely lost in loss record 47 of 75 ==1474135== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1474135== by 0x8FF3095: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:442) ==1474135== by 0x8FF132E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:14) ==1474135== by 0x8FF42D4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:18) ==1474135== by 0x8FF42F9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1064) ==1474135== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1474135== by 0x4006567: call_init (dl-init.c:33) ==1474135== by 0x4006567: _dl_init (dl-init.c:117) ==1474135== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1474135== by 0x3: ??? ==1474135== by 0x1FFF0002F2: ??? ==1474135== by 0x1FFF000360: ??? ==1474135== by 0x1FFF00036E: ??? ==1474135== by 0x1FFF00037B: ??? ==1474135== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1474135== LEAK SUMMARY: ==1474135== definitely lost: 448 bytes in 8 blocks ==1474135== indirectly lost: 0 bytes in 0 blocks ==1474135== possibly lost: 0 bytes in 0 blocks ==1474135== still reachable: 5,848 bytes in 106 blocks ==1474135== suppressed: 700,648 bytes in 9,371 blocks ==1474135== Reachable blocks (those to which a pointer was found) are not shown. ==1474135== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1474135== ==1474135== For lists of detected and suppressed errors, rerun with: -s ==1474135== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 33 from 33)