==1588098== Memcheck, a memory error detector ==1588098== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1588098== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1588098== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCellForCrypt -malloc_debug -malloc_dump -memory_info ==1588098== Parent PID: 1572417 ==1588098== ==1588098== ==1588098== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1588098== Open file descriptor 12: ==1588098== at 0xF54B22D: pipe (pipe.c:29) ==1588098== by 0x1B42E07D: ??? ==1588098== by 0x1663D4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1588098== by 0x12EFE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588098== by 0x12E97D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588098== by 0x11B8ED38: PetscInitialize (pinit.c:924) ==1588098== by 0xEE5315B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1588098== by 0xEE531A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1588098== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1588098== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1588098== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1588098== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1588098== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1588098== by 0x118975: main (TestCellForCrypt.cpp:18) ==1588098== ==1588098== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1588098== at 0xF54FBCC: __open_nocancel (open64_nocancel.c:39) ==1588098== by 0xF4D3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1588098== by 0xEE88822: ??? ==1588098== by 0xEE8896F: ??? ==1588098== by 0x166E26DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1588098== by 0x166E2938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1588098== by 0x16698922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1588098== by 0x1663D2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1588098== by 0x12EFE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588098== by 0x12E97D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1588098== by 0x11B8ED38: PetscInitialize (pinit.c:924) ==1588098== by 0xEE5315B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1588098== by 0xEE531A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1588098== by 0x11EA7E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1588098== by 0x11A173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1588098== by 0x11C6C4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1588098== by 0x11C5C0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1588098== by 0x11CBD3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1588098== by 0x118975: main (TestCellForCrypt.cpp:18) ==1588098== ==1588098== Open file descriptor 116: ==1588098== ==1588098== ==1588098== Open file descriptor 112: ==1588098== ==1588098== ==1588098== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellForCrypt_valgrind.txt ==1588098== ==1588098== ==1588098== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1588098== ==1588098== ==1588098== ==1588098== HEAP SUMMARY: ==1588098== in use at exit: 707,175 bytes in 9,491 blocks ==1588098== total heap usage: 58,114 allocs, 48,623 frees, 1,354,284,348 bytes allocated ==1588098== ==1588098== 448 bytes in 8 blocks are definitely lost in loss record 53 of 81 ==1588098== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1588098== by 0x1078E975: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==1588098== by 0x1078CC0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==1588098== by 0x1078FBB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==1588098== by 0x1078FBD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==1588098== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1588098== by 0x4006567: call_init (dl-init.c:33) ==1588098== by 0x4006567: _dl_init (dl-init.c:117) ==1588098== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1588098== by 0x3: ??? ==1588098== by 0x1FFF000306: ??? ==1588098== by 0x1FFF00036A: ??? ==1588098== by 0x1FFF000378: ??? ==1588098== by 0x1FFF000385: ??? ==1588098== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1588098== LEAK SUMMARY: ==1588098== definitely lost: 448 bytes in 8 blocks ==1588098== indirectly lost: 0 bytes in 0 blocks ==1588098== possibly lost: 0 bytes in 0 blocks ==1588098== still reachable: 6,008 bytes in 108 blocks ==1588098== suppressed: 700,719 bytes in 9,375 blocks ==1588098== Reachable blocks (those to which a pointer was found) are not shown. ==1588098== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1588098== ==1588098== For lists of detected and suppressed errors, rerun with: -s ==1588098== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 37 from 37)