==1632791== Memcheck, a memory error detector ==1632791== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1632791== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1632791== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningDifferentialAdhesionSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==1632791== Parent PID: 1617327 ==1632791== ==1632791== ==1632791== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1632791== Open file descriptor 12: ==1632791== at 0x10D6B22D: pipe (pipe.c:29) ==1632791== by 0x1976907D: ??? ==1632791== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1632791== by 0x10675418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1632791== by 0x1060ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1632791== by 0xF2E5D38: PetscInitialize (pinit.c:924) ==1632791== by 0xF1BC15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1632791== by 0xF1BC1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1632791== by 0x123CFF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1632791== by 0x11F693: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1632791== by 0x1218FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1632791== by 0x1217F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1632791== by 0x121E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1632791== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==1632791== ==1632791== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1632791== at 0x10D6FBCC: __open_nocancel (open64_nocancel.c:39) ==1632791== by 0x10CF3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1632791== by 0x1056F822: ??? ==1632791== by 0x1056F96F: ??? ==1632791== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1632791== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1632791== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1632791== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1632791== by 0x10675418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1632791== by 0x1060ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1632791== by 0xF2E5D38: PetscInitialize (pinit.c:924) ==1632791== by 0xF1BC15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1632791== by 0xF1BC1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1632791== by 0x123CFF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1632791== by 0x11F693: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1632791== by 0x1218FC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1632791== by 0x1217F8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1632791== by 0x121E0B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1632791== by 0x11DE95: main (TestRunningDifferentialAdhesionSimulationsTutorial.cpp:18) ==1632791== ==1632791== Open file descriptor 116: ==1632791== ==1632791== ==1632791== Open file descriptor 112: ==1632791== ==1632791== ==1632791== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningDifferentialAdhesionSimulationsTutorial_valgrind.txt ==1632791== ==1632791== ==1632791== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1632791== ==1632791== ==1632791== ==1632791== HEAP SUMMARY: ==1632791== in use at exit: 706,976 bytes in 9,487 blocks ==1632791== total heap usage: 2,566,341 allocs, 2,556,854 frees, 1,478,881,493 bytes allocated ==1632791== ==1632791== 448 bytes in 8 blocks are definitely lost in loss record 49 of 77 ==1632791== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1632791== by 0xE3D9975: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==1632791== by 0xE3D7C0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==1632791== by 0xE3DABB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==1632791== by 0xE3DABD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==1632791== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1632791== by 0x4006567: call_init (dl-init.c:33) ==1632791== by 0x4006567: _dl_init (dl-init.c:117) ==1632791== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1632791== by 0x3: ??? ==1632791== by 0x1FFF0002B6: ??? ==1632791== by 0x1FFF000341: ??? ==1632791== by 0x1FFF00034F: ??? ==1632791== by 0x1FFF00035C: ??? ==1632791== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1632791== LEAK SUMMARY: ==1632791== definitely lost: 448 bytes in 8 blocks ==1632791== indirectly lost: 0 bytes in 0 blocks ==1632791== possibly lost: 0 bytes in 0 blocks ==1632791== still reachable: 5,896 bytes in 108 blocks ==1632791== suppressed: 700,632 bytes in 9,371 blocks ==1632791== Reachable blocks (those to which a pointer was found) are not shown. ==1632791== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1632791== ==1632791== For lists of detected and suppressed errors, rerun with: -s ==1632791== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 33 from 33)