==1768453== Memcheck, a memory error detector ==1768453== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1768453== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1768453== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestElement -malloc_debug -malloc_dump -memory_info ==1768453== Parent PID: 1768066 ==1768453== ==1768453== ==1768453== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1768453== Open file descriptor 12: ==1768453== at 0x6D0822D: pipe (pipe.c:29) ==1768453== by 0x1009207D: ??? ==1768453== by 0xBA1C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1768453== by 0x8353418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768453== by 0x82ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768453== by 0x6FE3D38: PetscInitialize (pinit.c:924) ==1768453== by 0x652715B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1768453== by 0x65271A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1768453== by 0x12B6BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1768453== by 0x126545: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1768453== by 0x129444: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1768453== by 0x1292E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1768453== by 0x12997B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1768453== by 0x124875: main (TestElement.cpp:19) ==1768453== ==1768453== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1768453== at 0x6D0CBCC: __open_nocancel (open64_nocancel.c:39) ==1768453== by 0x6C90C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1768453== by 0x655C822: ??? ==1768453== by 0x655C96F: ??? ==1768453== by 0xBAC16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1768453== by 0xBAC1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1768453== by 0xBA77922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1768453== by 0xBA1C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1768453== by 0x8353418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768453== by 0x82ECD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768453== by 0x6FE3D38: PetscInitialize (pinit.c:924) ==1768453== by 0x652715B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1768453== by 0x65271A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1768453== by 0x12B6BC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1768453== by 0x126545: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1768453== by 0x129444: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1768453== by 0x1292E4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1768453== by 0x12997B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1768453== by 0x124875: main (TestElement.cpp:19) ==1768453== ==1768453== Open file descriptor 116: ==1768453== ==1768453== ==1768453== Open file descriptor 112: ==1768453== ==1768453== ==1768453== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestElement_valgrind.txt ==1768453== ==1768453== ==1768453== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1768453== ==1768453== ==1768453== ==1768453== HEAP SUMMARY: ==1768453== in use at exit: 706,903 bytes in 9,489 blocks ==1768453== total heap usage: 68,123 allocs, 58,634 frees, 1,355,587,671 bytes allocated ==1768453== ==1768453== 448 bytes in 8 blocks are definitely lost in loss record 51 of 76 ==1768453== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1768453== by 0x5746975: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==1768453== by 0x5744C0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==1768453== by 0x5747BB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==1768453== by 0x5747BD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==1768453== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1768453== by 0x4006567: call_init (dl-init.c:33) ==1768453== by 0x4006567: _dl_init (dl-init.c:117) ==1768453== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1768453== by 0x3: ??? ==1768453== by 0x1FFF000312: ??? ==1768453== by 0x1FFF000370: ??? ==1768453== by 0x1FFF00037E: ??? ==1768453== by 0x1FFF00038B: ??? ==1768453== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1768453== LEAK SUMMARY: ==1768453== definitely lost: 448 bytes in 8 blocks ==1768453== indirectly lost: 0 bytes in 0 blocks ==1768453== possibly lost: 0 bytes in 0 blocks ==1768453== still reachable: 5,848 bytes in 106 blocks ==1768453== suppressed: 700,607 bytes in 9,375 blocks ==1768453== Reachable blocks (those to which a pointer was found) are not shown. ==1768453== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1768453== ==1768453== For lists of detected and suppressed errors, rerun with: -s ==1768453== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 34 from 34)