==1768663== Memcheck, a memory error detector ==1768663== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1768663== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1768663== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestMeshUtilityFunctions -malloc_debug -malloc_dump -memory_info ==1768663== Parent PID: 1768066 ==1768663== ==1768663== ==1768663== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1768663== Open file descriptor 12: ==1768663== at 0x696B22D: pipe (pipe.c:29) ==1768663== by 0x1009307D: ??? ==1768663== by 0xB9D94CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1768663== by 0x7F27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768663== by 0x7EC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768663== by 0x6BB5D38: PetscInitialize (pinit.c:924) ==1768663== by 0x65B615B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1768663== by 0x65B61A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1768663== by 0x11E530: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1768663== by 0x119E33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1768663== by 0x11C2F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1768663== by 0x11C1F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1768663== by 0x11C805: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1768663== by 0x118635: main (TestMeshUtilityFunctions.cpp:18) ==1768663== ==1768663== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1768663== at 0x696FBCC: __open_nocancel (open64_nocancel.c:39) ==1768663== by 0x68F3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1768663== by 0x65EB822: ??? ==1768663== by 0x65EB96F: ??? ==1768663== by 0xBA7E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1768663== by 0xBA7E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1768663== by 0xBA34922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1768663== by 0xB9D92DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1768663== by 0x7F27418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768663== by 0x7EC0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1768663== by 0x6BB5D38: PetscInitialize (pinit.c:924) ==1768663== by 0x65B615B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1768663== by 0x65B61A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1768663== by 0x11E530: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1768663== by 0x119E33: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1768663== by 0x11C2F6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1768663== by 0x11C1F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1768663== by 0x11C805: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1768663== by 0x118635: main (TestMeshUtilityFunctions.cpp:18) ==1768663== ==1768663== Open file descriptor 116: ==1768663== ==1768663== ==1768663== Open file descriptor 112: ==1768663== ==1768663== ==1768663== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshUtilityFunctions_valgrind.txt ==1768663== ==1768663== ==1768663== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1768663== ==1768663== ==1768663== ==1768663== HEAP SUMMARY: ==1768663== in use at exit: 709,455 bytes in 9,490 blocks ==1768663== total heap usage: 49,636 allocs, 40,146 frees, 1,353,466,831 bytes allocated ==1768663== ==1768663== 448 bytes in 8 blocks are definitely lost in loss record 51 of 77 ==1768663== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1768663== by 0x5746975: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==1768663== by 0x5744C0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==1768663== by 0x5747BB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==1768663== by 0x5747BD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==1768663== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1768663== by 0x4006567: call_init (dl-init.c:33) ==1768663== by 0x4006567: _dl_init (dl-init.c:117) ==1768663== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1768663== by 0x3: ??? ==1768663== by 0x1FFF0002F6: ??? ==1768663== by 0x1FFF000361: ??? ==1768663== by 0x1FFF00036F: ??? ==1768663== by 0x1FFF00037C: ??? ==1768663== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1768663== LEAK SUMMARY: ==1768663== definitely lost: 448 bytes in 8 blocks ==1768663== indirectly lost: 0 bytes in 0 blocks ==1768663== possibly lost: 0 bytes in 0 blocks ==1768663== still reachable: 8,400 bytes in 107 blocks ==1768663== suppressed: 700,607 bytes in 9,375 blocks ==1768663== Reachable blocks (those to which a pointer was found) are not shown. ==1768663== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1768663== ==1768663== For lists of detected and suppressed errors, rerun with: -s ==1768663== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 34 from 34)