==1868458== Memcheck, a memory error detector ==1868458== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1868458== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1868458== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestElectrodes -malloc_debug -malloc_dump -memory_info ==1868458== Parent PID: 1849946 ==1868458== ==1868458== ==1868458== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1868458== Open file descriptor 12: ==1868458== at 0xBD3022D: pipe (pipe.c:29) ==1868458== by 0x142F807D: ??? ==1868458== by 0xFAAF4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1868458== by 0xB620418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868458== by 0xB5B9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868458== by 0xA290D38: PetscInitialize (pinit.c:924) ==1868458== by 0xA16715B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1868458== by 0xA1671A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1868458== by 0x11B294: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1868458== by 0x116925: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1868458== by 0x1190FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1868458== by 0x118F9E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1868458== by 0x119635: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1868458== by 0x114C55: main (TestElectrodes.cpp:19) ==1868458== ==1868458== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1868458== at 0xBD34BCC: __open_nocancel (open64_nocancel.c:39) ==1868458== by 0xBCB8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1868458== by 0xB51A822: ??? ==1868458== by 0xB51A96F: ??? ==1868458== by 0xFB546DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1868458== by 0xFB54938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1868458== by 0xFB0A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1868458== by 0xFAAF2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1868458== by 0xB620418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868458== by 0xB5B9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1868458== by 0xA290D38: PetscInitialize (pinit.c:924) ==1868458== by 0xA16715B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1868458== by 0xA1671A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1868458== by 0x11B294: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1868458== by 0x116925: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1868458== by 0x1190FE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1868458== by 0x118F9E: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1868458== by 0x119635: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1868458== by 0x114C55: main (TestElectrodes.cpp:19) ==1868458== ==1868458== Open file descriptor 116: ==1868458== ==1868458== ==1868458== Open file descriptor 112: ==1868458== ==1868458== ==1868458== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestElectrodes_valgrind.txt ==1868458== ==1868458== ==1868458== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1868458== ==1868458== ==1868458== ==1868458== HEAP SUMMARY: ==1868458== in use at exit: 707,015 bytes in 9,489 blocks ==1868458== total heap usage: 273,213 allocs, 263,724 frees, 1,380,728,953 bytes allocated ==1868458== ==1868458== 448 bytes in 8 blocks are definitely lost in loss record 52 of 80 ==1868458== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1868458== by 0x9386975: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==1868458== by 0x9384C0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==1868458== by 0x9387BB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==1868458== by 0x9387BD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==1868458== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1868458== by 0x4006567: call_init (dl-init.c:33) ==1868458== by 0x4006567: _dl_init (dl-init.c:117) ==1868458== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1868458== by 0x3: ??? ==1868458== by 0x1FFF00030A: ??? ==1868458== by 0x1FFF00036C: ??? ==1868458== by 0x1FFF00037A: ??? ==1868458== by 0x1FFF000387: ??? ==1868458== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1868458== LEAK SUMMARY: ==1868458== definitely lost: 448 bytes in 8 blocks ==1868458== indirectly lost: 0 bytes in 0 blocks ==1868458== possibly lost: 0 bytes in 0 blocks ==1868458== still reachable: 5,848 bytes in 106 blocks ==1868458== suppressed: 700,719 bytes in 9,375 blocks ==1868458== Reachable blocks (those to which a pointer was found) are not shown. ==1868458== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1868458== ==1868458== For lists of detected and suppressed errors, rerun with: -s ==1868458== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 38 from 38)