==1851420== Memcheck, a memory error detector ==1851420== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1851420== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1851420== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimulationsWithParabolicBoxDomainPdeModifier -malloc_debug -malloc_dump -memory_info ==1851420== Parent PID: 1849946 ==1851420== ==1851420== ==1851420== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1851420== Open file descriptor 12: ==1851420== at 0x110F722D: pipe (pipe.c:29) ==1851420== by 0x1975907D: ??? ==1851420== by 0x14CBE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1851420== by 0x10A01418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1851420== by 0x1099AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1851420== by 0xF671D38: PetscInitialize (pinit.c:924) ==1851420== by 0xF54815B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1851420== by 0xF5481A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1851420== by 0x1284D9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1851420== by 0x123A53: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1851420== by 0x125FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1851420== by 0x125EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1851420== by 0x1264D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1851420== by 0x122255: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==1851420== ==1851420== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1851420== at 0x110FBBCC: __open_nocancel (open64_nocancel.c:39) ==1851420== by 0x1107FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1851420== by 0x108FB822: ??? ==1851420== by 0x108FB96F: ??? ==1851420== by 0x14D636DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1851420== by 0x14D63938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1851420== by 0x14D19922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1851420== by 0x14CBE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1851420== by 0x10A01418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1851420== by 0x1099AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1851420== by 0xF671D38: PetscInitialize (pinit.c:924) ==1851420== by 0xF54815B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1851420== by 0xF5481A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1851420== by 0x1284D9: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1851420== by 0x123A53: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1851420== by 0x125FCA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1851420== by 0x125EC5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1851420== by 0x1264D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1851420== by 0x122255: main (TestSimulationsWithParabolicBoxDomainPdeModifier.cpp:18) ==1851420== ==1851420== Open file descriptor 116: ==1851420== ==1851420== ==1851420== Open file descriptor 112: ==1851420== ==1851420== ==1851420== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimulationsWithParabolicBoxDomainPdeModifier_valgrind.txt ==1851420== ==1851420== ==1851420== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1851420== ==1851420== ==1851420== ==1851420== HEAP SUMMARY: ==1851420== in use at exit: 706,960 bytes in 9,486 blocks ==1851420== total heap usage: 4,512,722 allocs, 4,503,236 frees, 1,842,441,255 bytes allocated ==1851420== ==1851420== 448 bytes in 8 blocks are definitely lost in loss record 48 of 73 ==1851420== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==1851420== by 0xE767975: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==1851420== by 0xE765C0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==1851420== by 0xE768BB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==1851420== by 0xE768BD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==1851420== by 0x400647D: call_init.part.0 (dl-init.c:70) ==1851420== by 0x4006567: call_init (dl-init.c:33) ==1851420== by 0x4006567: _dl_init (dl-init.c:117) ==1851420== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==1851420== by 0x3: ??? ==1851420== by 0x1FFF0002BA: ??? ==1851420== by 0x1FFF000343: ??? ==1851420== by 0x1FFF000351: ??? ==1851420== by 0x1FFF00035E: ??? ==1851420== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==1851420== LEAK SUMMARY: ==1851420== definitely lost: 448 bytes in 8 blocks ==1851420== indirectly lost: 0 bytes in 0 blocks ==1851420== possibly lost: 0 bytes in 0 blocks ==1851420== still reachable: 5,880 bytes in 107 blocks ==1851420== suppressed: 700,632 bytes in 9,371 blocks ==1851420== Reachable blocks (those to which a pointer was found) are not shown. ==1851420== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1851420== ==1851420== For lists of detected and suppressed errors, rerun with: -s ==1851420== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 33 from 33)