==1966644== Memcheck, a memory error detector ==1966644== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1966644== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1966644== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==1966644== Parent PID: 1965508 ==1966644== ==1966644== ==1966644== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1966644== Open file descriptor 12: ==1966644== at 0xE40722D: pipe (pipe.c:29) ==1966644== by 0x18A0407D: ??? ==1966644== by 0x12F544CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1966644== by 0xE058418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1966644== by 0xDFF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1966644== by 0xCCC8D38: PetscInitialize (pinit.c:924) ==1966644== by 0xCB9DFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1966644== by 0xCB9E01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1966644== by 0x1292D3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1966644== by 0x123FC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1966644== by 0x126EA2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1966644== by 0x126D42: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1966644== by 0x1273D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1966644== by 0x1222F5: main (TestCell.cpp:19) ==1966644== ==1966644== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1966644== at 0xE40BBCC: __open_nocancel (open64_nocancel.c:39) ==1966644== by 0xE38FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1966644== by 0xDF52822: ??? ==1966644== by 0xDF5296F: ??? ==1966644== by 0x12FF96DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1966644== by 0x12FF9938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1966644== by 0x12FAF922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1966644== by 0x12F542DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1966644== by 0xE058418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1966644== by 0xDFF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1966644== by 0xCCC8D38: PetscInitialize (pinit.c:924) ==1966644== by 0xCB9DFCF: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1966644== by 0xCB9E01D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1966644== by 0x1292D3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1966644== by 0x123FC5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1966644== by 0x126EA2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1966644== by 0x126D42: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1966644== by 0x1273D9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1966644== by 0x1222F5: main (TestCell.cpp:19) ==1966644== ==1966644== Open file descriptor 116: ==1966644== ==1966644== ==1966644== Open file descriptor 112: ==1966644== ==1966644== ==1966644== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==1966644== ==1966644== ==1966644== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1966644== ==1966644== ==1966644== ==1966644== HEAP SUMMARY: ==1966644== in use at exit: 700,816 bytes in 9,375 blocks ==1966644== total heap usage: 5,185,264 allocs, 5,175,889 frees, 1,834,224,902 bytes allocated ==1966644== ==1966644== LEAK SUMMARY: ==1966644== definitely lost: 0 bytes in 0 blocks ==1966644== indirectly lost: 0 bytes in 0 blocks ==1966644== possibly lost: 0 bytes in 0 blocks ==1966644== still reachable: 184 bytes in 4 blocks ==1966644== suppressed: 700,632 bytes in 9,371 blocks ==1966644== Reachable blocks (those to which a pointer was found) are not shown. ==1966644== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1966644== ==1966644== For lists of detected and suppressed errors, rerun with: -s ==1966644== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)