==2036519== Memcheck, a memory error detector ==2036519== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2036519== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2036519== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2036519== Parent PID: 2021734 ==2036519== ==2036519== ==2036519== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2036519== Open file descriptor 12: ==2036519== at 0xEC7922D: pipe (pipe.c:29) ==2036519== by 0x18A0507D: ??? ==2036519== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2036519== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2036519== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2036519== by 0xF565D38: PetscInitialize (pinit.c:924) ==2036519== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2036519== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2036519== by 0x1D79DA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2036519== by 0x1CF2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2036519== by 0x1D2B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2036519== by 0x1D2A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2036519== by 0x1D309F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2036519== by 0x1CD5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==2036519== ==2036519== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2036519== at 0xEC7DBCC: __open_nocancel (open64_nocancel.c:39) ==2036519== by 0xEC01C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2036519== by 0xE48B822: ??? ==2036519== by 0xE48B96F: ??? ==2036519== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2036519== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2036519== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2036519== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2036519== by 0x108D5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2036519== by 0x1086ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2036519== by 0xF565D38: PetscInitialize (pinit.c:924) ==2036519== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2036519== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2036519== by 0x1D79DA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2036519== by 0x1CF2E9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2036519== by 0x1D2B68: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2036519== by 0x1D2A08: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2036519== by 0x1D309F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2036519== by 0x1CD5D5: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==2036519== ==2036519== Open file descriptor 116: ==2036519== ==2036519== ==2036519== Open file descriptor 112: ==2036519== ==2036519== ==2036519== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==2036519== ==2036519== ==2036519== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2036519== ==2036519== ==2036519== ==2036519== HEAP SUMMARY: ==2036519== in use at exit: 700,704 bytes in 9,375 blocks ==2036519== total heap usage: 11,683,905 allocs, 11,674,530 frees, 2,223,637,762 bytes allocated ==2036519== ==2036519== LEAK SUMMARY: ==2036519== definitely lost: 0 bytes in 0 blocks ==2036519== indirectly lost: 0 bytes in 0 blocks ==2036519== possibly lost: 0 bytes in 0 blocks ==2036519== still reachable: 72 bytes in 4 blocks ==2036519== suppressed: 700,632 bytes in 9,371 blocks ==2036519== Reachable blocks (those to which a pointer was found) are not shown. ==2036519== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2036519== ==2036519== For lists of detected and suppressed errors, rerun with: -s ==2036519== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)