==2085552== Memcheck, a memory error detector ==2085552== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2085552== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2085552== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestAbstractContractionCellFactory -malloc_debug -malloc_dump -memory_info ==2085552== Parent PID: 2067151 ==2085552== ==2085552== ==2085552== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2085552== Open file descriptor 12: ==2085552== at 0xA8A222D: pipe (pipe.c:29) ==2085552== by 0x142F807D: ??? ==2085552== by 0xFAFC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2085552== by 0xBE1A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2085552== by 0xBDB3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2085552== by 0xAAAAD38: PetscInitialize (pinit.c:924) ==2085552== by 0xA18E15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2085552== by 0xA18E1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2085552== by 0x11F78E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2085552== by 0x11A553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2085552== by 0x11C978: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2085552== by 0x11C873: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2085552== by 0x11CE87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2085552== by 0x118D55: main (TestAbstractContractionCellFactory.cpp:18) ==2085552== ==2085552== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2085552== at 0xA8A6BCC: __open_nocancel (open64_nocancel.c:39) ==2085552== by 0xA82AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2085552== by 0xA1C3822: ??? ==2085552== by 0xA1C396F: ??? ==2085552== by 0xFBA16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2085552== by 0xFBA1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2085552== by 0xFB57922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2085552== by 0xFAFC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2085552== by 0xBE1A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2085552== by 0xBDB3D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2085552== by 0xAAAAD38: PetscInitialize (pinit.c:924) ==2085552== by 0xA18E15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2085552== by 0xA18E1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2085552== by 0x11F78E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2085552== by 0x11A553: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2085552== by 0x11C978: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2085552== by 0x11C873: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2085552== by 0x11CE87: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2085552== by 0x118D55: main (TestAbstractContractionCellFactory.cpp:18) ==2085552== ==2085552== Open file descriptor 116: ==2085552== ==2085552== ==2085552== Open file descriptor 112: ==2085552== ==2085552== ==2085552== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAbstractContractionCellFactory_valgrind.txt ==2085552== ==2085552== ==2085552== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2085552== ==2085552== ==2085552== ==2085552== HEAP SUMMARY: ==2085552== in use at exit: 707,495 bytes in 9,499 blocks ==2085552== total heap usage: 169,136 allocs, 159,637 frees, 1,378,003,582 bytes allocated ==2085552== ==2085552== 448 bytes in 8 blocks are definitely lost in loss record 55 of 83 ==2085552== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==2085552== by 0x93AD875: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==2085552== by 0x93ABB0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==2085552== by 0x93AEAB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==2085552== by 0x93AEAD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==2085552== by 0x400647D: call_init.part.0 (dl-init.c:70) ==2085552== by 0x4006567: call_init (dl-init.c:33) ==2085552== by 0x4006567: _dl_init (dl-init.c:117) ==2085552== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==2085552== by 0x3: ??? ==2085552== by 0x1FFF0002EA: ??? ==2085552== by 0x1FFF000360: ??? ==2085552== by 0x1FFF00036E: ??? ==2085552== by 0x1FFF00037B: ??? ==2085552== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==2085552== LEAK SUMMARY: ==2085552== definitely lost: 448 bytes in 8 blocks ==2085552== indirectly lost: 0 bytes in 0 blocks ==2085552== possibly lost: 0 bytes in 0 blocks ==2085552== still reachable: 5,848 bytes in 106 blocks ==2085552== suppressed: 701,199 bytes in 9,385 blocks ==2085552== Reachable blocks (those to which a pointer was found) are not shown. ==2085552== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2085552== ==2085552== For lists of detected and suppressed errors, rerun with: -s ==2085552== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 43 from 38)