==2084542== Memcheck, a memory error detector ==2084542== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2084542== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2084542== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestIonicModels -malloc_debug -malloc_dump -memory_info ==2084542== Parent PID: 2067151 ==2084542== ==2084542== ==2084542== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2084542== Open file descriptor 12: ==2084542== at 0x9D1A22D: pipe (pipe.c:29) ==2084542== by 0x142F707D: ??? ==2084542== by 0xEDEE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2084542== by 0x994F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2084542== by 0x98E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2084542== by 0x85DFD38: PetscInitialize (pinit.c:924) ==2084542== by 0x845415B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2084542== by 0x84541A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2084542== by 0x136E61: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2084542== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2084542== by 0x1342E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2084542== by 0x134180: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2084542== by 0x134817: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2084542== by 0x12BDA5: main (TestIonicModels.cpp:19) ==2084542== ==2084542== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2084542== at 0x9D1EBCC: __open_nocancel (open64_nocancel.c:39) ==2084542== by 0x9CA2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2084542== by 0x8489822: ??? ==2084542== by 0x848996F: ??? ==2084542== by 0xEE956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2084542== by 0xEE95938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2084542== by 0xEE4B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2084542== by 0xEDEE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2084542== by 0x994F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2084542== by 0x98E8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2084542== by 0x85DFD38: PetscInitialize (pinit.c:924) ==2084542== by 0x845415B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2084542== by 0x84541A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2084542== by 0x136E61: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2084542== by 0x13133D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2084542== by 0x1342E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2084542== by 0x134180: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2084542== by 0x134817: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2084542== by 0x12BDA5: main (TestIonicModels.cpp:19) ==2084542== ==2084542== Open file descriptor 116: ==2084542== ==2084542== ==2084542== Open file descriptor 112: ==2084542== ==2084542== ==2084542== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestIonicModels_valgrind.txt ==2084542== ==2084542== ==2084542== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2084542== ==2084542== ==2084542== ==2084542== HEAP SUMMARY: ==2084542== in use at exit: 708,772 bytes in 9,489 blocks ==2084542== total heap usage: 1,894,485 allocs, 1,884,996 frees, 3,084,959,918 bytes allocated ==2084542== ==2084542== 448 bytes in 8 blocks are definitely lost in loss record 50 of 79 ==2084542== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==2084542== by 0xB6C2875: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==2084542== by 0xB6C0B0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==2084542== by 0xB6C3AB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==2084542== by 0xB6C3AD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==2084542== by 0x400647D: call_init.part.0 (dl-init.c:70) ==2084542== by 0x4006567: call_init (dl-init.c:33) ==2084542== by 0x4006567: _dl_init (dl-init.c:117) ==2084542== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==2084542== by 0x3: ??? ==2084542== by 0x1FFF000312: ??? ==2084542== by 0x1FFF000375: ??? ==2084542== by 0x1FFF000383: ??? ==2084542== by 0x1FFF000390: ??? ==2084542== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==2084542== LEAK SUMMARY: ==2084542== definitely lost: 448 bytes in 8 blocks ==2084542== indirectly lost: 0 bytes in 0 blocks ==2084542== possibly lost: 0 bytes in 0 blocks ==2084542== still reachable: 7,676 bytes in 110 blocks ==2084542== suppressed: 700,648 bytes in 9,371 blocks ==2084542== Reachable blocks (those to which a pointer was found) are not shown. ==2084542== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2084542== ==2084542== For lists of detected and suppressed errors, rerun with: -s ==2084542== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 33 from 33)