==2069245== Memcheck, a memory error detector ==2069245== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2069245== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2069245== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRepresentativeImmersedBoundarySimulations -malloc_debug -malloc_dump -memory_info ==2069245== Parent PID: 2067151 ==2069245== ==2069245== ==2069245== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2069245== Open file descriptor 12: ==2069245== at 0x10D5A22D: pipe (pipe.c:29) ==2069245== by 0x1975907D: ??? ==2069245== by 0x14CD24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2069245== by 0x10664418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069245== by 0x105FDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069245== by 0xF2D4D38: PetscInitialize (pinit.c:924) ==2069245== by 0xF1AB15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2069245== by 0xF1AB1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2069245== by 0x12B2E7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2069245== by 0x126793: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2069245== by 0x128BBA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2069245== by 0x128AB5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2069245== by 0x1290C9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2069245== by 0x124F95: main (TestRepresentativeImmersedBoundarySimulations.cpp:18) ==2069245== ==2069245== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2069245== at 0x10D5EBCC: __open_nocancel (open64_nocancel.c:39) ==2069245== by 0x10CE2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2069245== by 0x1055E822: ??? ==2069245== by 0x1055E96F: ??? ==2069245== by 0x14D776DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2069245== by 0x14D77938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2069245== by 0x14D2D922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2069245== by 0x14CD22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2069245== by 0x10664418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069245== by 0x105FDD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2069245== by 0xF2D4D38: PetscInitialize (pinit.c:924) ==2069245== by 0xF1AB15B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2069245== by 0xF1AB1A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2069245== by 0x12B2E7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2069245== by 0x126793: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2069245== by 0x128BBA: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2069245== by 0x128AB5: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2069245== by 0x1290C9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2069245== by 0x124F95: main (TestRepresentativeImmersedBoundarySimulations.cpp:18) ==2069245== ==2069245== Open file descriptor 116: ==2069245== ==2069245== ==2069245== Open file descriptor 112: ==2069245== ==2069245== ==2069245== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRepresentativeImmersedBoundarySimulations_valgrind.txt ==2069245== ==2069245== ==2069245== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2069245== ==2069245== ==2069245== ==2069245== HEAP SUMMARY: ==2069245== in use at exit: 706,960 bytes in 9,486 blocks ==2069245== total heap usage: 2,317,467 allocs, 2,307,981 frees, 2,116,235,984 bytes allocated ==2069245== ==2069245== 448 bytes in 8 blocks are definitely lost in loss record 48 of 76 ==2069245== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==2069245== by 0xE3C8875: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==2069245== by 0xE3C6B0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==2069245== by 0xE3C9AB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==2069245== by 0xE3C9AD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==2069245== by 0x400647D: call_init.part.0 (dl-init.c:70) ==2069245== by 0x4006567: call_init (dl-init.c:33) ==2069245== by 0x4006567: _dl_init (dl-init.c:117) ==2069245== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==2069245== by 0x3: ??? ==2069245== by 0x1FFF0002CA: ??? ==2069245== by 0x1FFF000350: ??? ==2069245== by 0x1FFF00035E: ??? ==2069245== by 0x1FFF00036B: ??? ==2069245== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==2069245== LEAK SUMMARY: ==2069245== definitely lost: 448 bytes in 8 blocks ==2069245== indirectly lost: 0 bytes in 0 blocks ==2069245== possibly lost: 0 bytes in 0 blocks ==2069245== still reachable: 5,880 bytes in 107 blocks ==2069245== suppressed: 700,632 bytes in 9,371 blocks ==2069245== Reachable blocks (those to which a pointer was found) are not shown. ==2069245== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2069245== ==2069245== For lists of detected and suppressed errors, rerun with: -s ==2069245== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 33 from 33)