==2103761== Memcheck, a memory error detector ==2103761== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2103761== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2103761== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/mesh/test/TestPerElementWriter -malloc_debug -malloc_dump -memory_info ==2103761== Parent PID: 2103158 ==2103761== ==2103761== ==2103761== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2103761== Open file descriptor 12: ==2103761== at 0x80D622D: pipe (pipe.c:29) ==2103761== by 0x1009407D: ??? ==2103761== by 0xB9CB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2103761== by 0x79E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2103761== by 0x797BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2103761== by 0x6650D38: PetscInitialize (pinit.c:924) ==2103761== by 0x652715B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2103761== by 0x65271A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2103761== by 0x118F80: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2103761== by 0x113739: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2103761== by 0x115E06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2103761== by 0x115D01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2103761== by 0x116315: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2103761== by 0x111DF5: main (TestPerElementWriter.cpp:18) ==2103761== ==2103761== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2103761== at 0x80DABCC: __open_nocancel (open64_nocancel.c:39) ==2103761== by 0x805EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2103761== by 0x78DA822: ??? ==2103761== by 0x78DA96F: ??? ==2103761== by 0xBA706DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2103761== by 0xBA70938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2103761== by 0xBA26922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2103761== by 0xB9CB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2103761== by 0x79E2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2103761== by 0x797BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2103761== by 0x6650D38: PetscInitialize (pinit.c:924) ==2103761== by 0x652715B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2103761== by 0x65271A9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2103761== by 0x118F80: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2103761== by 0x113739: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2103761== by 0x115E06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2103761== by 0x115D01: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2103761== by 0x116315: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2103761== by 0x111DF5: main (TestPerElementWriter.cpp:18) ==2103761== ==2103761== Open file descriptor 116: ==2103761== ==2103761== ==2103761== Open file descriptor 112: ==2103761== ==2103761== ==2103761== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPerElementWriter_valgrind.txt ==2103761== ==2103761== ==2103761== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2103761== ==2103761== ==2103761== ==2103761== HEAP SUMMARY: ==2103761== in use at exit: 706,903 bytes in 9,489 blocks ==2103761== total heap usage: 55,300 allocs, 45,811 frees, 1,354,075,362 bytes allocated ==2103761== ==2103761== 448 bytes in 8 blocks are definitely lost in loss record 53 of 78 ==2103761== at 0x4849013: operator new(unsigned long) (in /usr/libexec/valgrind/vgpreload_memcheck-amd64-linux.so) ==2103761== by 0x5746875: OpenSimplex2S::initLatticePoints() (OpenSimplex2S.cpp:462) ==2103761== by 0x5744B0E: OpenSimplex2S::Initializer::Initializer() (OpenSimplex2S.cpp:34) ==2103761== by 0x5747AB4: __static_initialization_and_destruction_0(int, int) (OpenSimplex2S.cpp:38) ==2103761== by 0x5747AD9: _GLOBAL__sub_I_OpenSimplex2S.cpp (OpenSimplex2S.cpp:1084) ==2103761== by 0x400647D: call_init.part.0 (dl-init.c:70) ==2103761== by 0x4006567: call_init (dl-init.c:33) ==2103761== by 0x4006567: _dl_init (dl-init.c:117) ==2103761== by 0x40202E9: ??? (in /usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2) ==2103761== by 0x3: ??? ==2103761== by 0x1FFF00030A: ??? ==2103761== by 0x1FFF000371: ??? ==2103761== by 0x1FFF00037F: ??? ==2103761== by 0x1FFF00038C: ??? ==2103761== { Memcheck:Leak match-leak-kinds: definite fun:_Znwm fun:_ZN13OpenSimplex2S17initLatticePointsEv fun:_ZN13OpenSimplex2S11InitializerC1Ev fun:_Z41__static_initialization_and_destruction_0ii fun:_GLOBAL__sub_I_OpenSimplex2S.cpp fun:call_init.part.0 fun:call_init fun:_dl_init obj:/usr/lib/x86_64-linux-gnu/ld-linux-x86-64.so.2 obj:* obj:* obj:* obj:* obj:* } ==2103761== LEAK SUMMARY: ==2103761== definitely lost: 448 bytes in 8 blocks ==2103761== indirectly lost: 0 bytes in 0 blocks ==2103761== possibly lost: 0 bytes in 0 blocks ==2103761== still reachable: 5,848 bytes in 106 blocks ==2103761== suppressed: 700,607 bytes in 9,375 blocks ==2103761== Reachable blocks (those to which a pointer was found) are not shown. ==2103761== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2103761== ==2103761== For lists of detected and suppressed errors, rerun with: -s ==2103761== ERROR SUMMARY: 1 errors from 1 contexts (suppressed: 36 from 36)