==2191314== Memcheck, a memory error detector ==2191314== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2191314== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2191314== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==2191314== Parent PID: 2190178 ==2191314== ==2191314== ==2191314== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2191314== Open file descriptor 12: ==2191314== at 0xE40722D: pipe (pipe.c:29) ==2191314== by 0x18A0407D: ??? ==2191314== by 0x12F554CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191314== by 0xE058418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191314== by 0xDFF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191314== by 0xCCC8D38: PetscInitialize (pinit.c:924) ==2191314== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191314== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191314== by 0x1292F3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2191314== by 0x123FE5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191314== by 0x126EC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191314== by 0x126D62: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191314== by 0x1273F9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191314== by 0x122315: main (TestCell.cpp:19) ==2191314== ==2191314== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2191314== at 0xE40BBCC: __open_nocancel (open64_nocancel.c:39) ==2191314== by 0xE38FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2191314== by 0xDF52822: ??? ==2191314== by 0xDF5296F: ??? ==2191314== by 0x12FFA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191314== by 0x12FFA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191314== by 0x12FB0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191314== by 0x12F552DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191314== by 0xE058418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191314== by 0xDFF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191314== by 0xCCC8D38: PetscInitialize (pinit.c:924) ==2191314== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191314== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191314== by 0x1292F3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2191314== by 0x123FE5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191314== by 0x126EC2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191314== by 0x126D62: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191314== by 0x1273F9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191314== by 0x122315: main (TestCell.cpp:19) ==2191314== ==2191314== Open file descriptor 113: ==2191314== ==2191314== ==2191314== Open file descriptor 110: ==2191314== ==2191314== ==2191314== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==2191314== ==2191314== ==2191314== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2191314== ==2191314== ==2191314== ==2191314== HEAP SUMMARY: ==2191314== in use at exit: 700,816 bytes in 9,375 blocks ==2191314== total heap usage: 5,185,275 allocs, 5,175,900 frees, 1,834,226,389 bytes allocated ==2191314== ==2191314== LEAK SUMMARY: ==2191314== definitely lost: 0 bytes in 0 blocks ==2191314== indirectly lost: 0 bytes in 0 blocks ==2191314== possibly lost: 0 bytes in 0 blocks ==2191314== still reachable: 184 bytes in 4 blocks ==2191314== suppressed: 700,632 bytes in 9,371 blocks ==2191314== Reachable blocks (those to which a pointer was found) are not shown. ==2191314== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2191314== ==2191314== For lists of detected and suppressed errors, rerun with: -s ==2191314== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 42 from 42)