==2206622== Memcheck, a memory error detector ==2206622== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2206622== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2206622== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestExtendedBidomainProblem -malloc_debug -malloc_dump -memory_info ==2206622== Parent PID: 2190178 ==2206622== ==2206622== ==2206622== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2206622== Open file descriptor 12: ==2206622== at 0xA5E422D: pipe (pipe.c:29) ==2206622== by 0x13F8107D: ??? ==2206622== by 0xD5864CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2206622== by 0x9ED4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2206622== by 0x9E6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2206622== by 0xA96ED38: PetscInitialize (pinit.c:924) ==2206622== by 0x9D9A0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2206622== by 0x9D9A101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2206622== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2206622== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2206622== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2206622== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2206622== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2206622== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==2206622== ==2206622== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2206622== at 0xA5E8BCC: __open_nocancel (open64_nocancel.c:39) ==2206622== by 0xA56CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2206622== by 0x9DCE822: ??? ==2206622== by 0x9DCE96F: ??? ==2206622== by 0xD62B6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2206622== by 0xD62B938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2206622== by 0xD5E1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2206622== by 0xD5862DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2206622== by 0x9ED4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2206622== by 0x9E6DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2206622== by 0xA96ED38: PetscInitialize (pinit.c:924) ==2206622== by 0x9D9A0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2206622== by 0x9D9A101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2206622== by 0x124904: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2206622== by 0x11F9B3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2206622== by 0x12261C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2206622== by 0x122517: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2206622== by 0x122B2B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2206622== by 0x11E1B5: main (TestExtendedBidomainProblem.cpp:18) ==2206622== ==2206622== Open file descriptor 113: ==2206622== ==2206622== ==2206622== Open file descriptor 110: ==2206622== ==2206622== ==2206622== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestExtendedBidomainProblem_valgrind.txt ==2206622== ==2206622== ==2206622== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2206622== ==2206622== ==2206622== ==2206622== HEAP SUMMARY: ==2206622== in use at exit: 701,152 bytes in 9,383 blocks ==2206622== total heap usage: 2,375,421 allocs, 2,366,038 frees, 2,483,506,144 bytes allocated ==2206622== ==2206622== LEAK SUMMARY: ==2206622== definitely lost: 0 bytes in 0 blocks ==2206622== indirectly lost: 0 bytes in 0 blocks ==2206622== possibly lost: 0 bytes in 0 blocks ==2206622== still reachable: 24 bytes in 2 blocks ==2206622== suppressed: 701,128 bytes in 9,381 blocks ==2206622== Reachable blocks (those to which a pointer was found) are not shown. ==2206622== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2206622== ==2206622== For lists of detected and suppressed errors, rerun with: -s ==2206622== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 39 from 34)