==2191863== Memcheck, a memory error detector ==2191863== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2191863== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2191863== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==2191863== Parent PID: 2190178 ==2191863== ==2191863== ==2191863== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2191863== Open file descriptor 12: ==2191863== at 0x100EC22D: pipe (pipe.c:29) ==2191863== by 0x18A0507D: ??? ==2191863== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191863== by 0xF90F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191863== by 0xF8A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191863== by 0xE57FD38: PetscInitialize (pinit.c:924) ==2191863== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191863== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191863== by 0x15A017: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2191863== by 0x152305: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191863== by 0x1557B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191863== by 0x155652: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191863== by 0x155CE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191863== by 0x150635: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==2191863== ==2191863== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2191863== at 0x100F0BCC: __open_nocancel (open64_nocancel.c:39) ==2191863== by 0x10074C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2191863== by 0xF809822: ??? ==2191863== by 0xF80996F: ??? ==2191863== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191863== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191863== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191863== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191863== by 0xF90F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191863== by 0xF8A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191863== by 0xE57FD38: PetscInitialize (pinit.c:924) ==2191863== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191863== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191863== by 0x15A017: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2191863== by 0x152305: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191863== by 0x1557B2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191863== by 0x155652: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191863== by 0x155CE9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191863== by 0x150635: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==2191863== ==2191863== Open file descriptor 113: ==2191863== ==2191863== ==2191863== Open file descriptor 110: ==2191863== ==2191863== ==2191863== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==2191863== ==2191863== ==2191863== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2191863== ==2191863== ==2191863== ==2191863== HEAP SUMMARY: ==2191863== in use at exit: 700,759 bytes in 9,378 blocks ==2191863== total heap usage: 223,442 allocs, 214,064 frees, 1,378,732,591 bytes allocated ==2191863== ==2191863== LEAK SUMMARY: ==2191863== definitely lost: 0 bytes in 0 blocks ==2191863== indirectly lost: 0 bytes in 0 blocks ==2191863== possibly lost: 0 bytes in 0 blocks ==2191863== still reachable: 56 bytes in 3 blocks ==2191863== suppressed: 700,703 bytes in 9,375 blocks ==2191863== Reachable blocks (those to which a pointer was found) are not shown. ==2191863== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2191863== ==2191863== For lists of detected and suppressed errors, rerun with: -s ==2191863== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)