==2191877== Memcheck, a memory error detector ==2191877== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2191877== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2191877== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2191877== Parent PID: 2190178 ==2191877== ==2191877== ==2191877== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2191877== Open file descriptor 12: ==2191877== at 0xEC2122D: pipe (pipe.c:29) ==2191877== by 0x18A0507D: ??? ==2191877== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191877== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191877== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191877== by 0xF47CD38: PetscInitialize (pinit.c:924) ==2191877== by 0xE4E60B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191877== by 0xE4E6101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191877== by 0x2E28EC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2191877== by 0x2D91A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191877== by 0x2DDA06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191877== by 0x2DD8A6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191877== by 0x2DDF3D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191877== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==2191877== ==2191877== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2191877== at 0xEC25BCC: __open_nocancel (open64_nocancel.c:39) ==2191877== by 0xEBA9C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2191877== by 0xE51A822: ??? ==2191877== by 0xE51A96F: ??? ==2191877== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191877== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191877== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191877== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191877== by 0x107EE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191877== by 0x10787D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191877== by 0xF47CD38: PetscInitialize (pinit.c:924) ==2191877== by 0xE4E60B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191877== by 0xE4E6101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191877== by 0x2E28EC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2191877== by 0x2D91A9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191877== by 0x2DDA06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191877== by 0x2DD8A6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191877== by 0x2DDF3D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191877== by 0x2D7495: main (TestNodeBasedCellPopulation.cpp:19) ==2191877== ==2191877== Open file descriptor 113: ==2191877== ==2191877== ==2191877== Open file descriptor 110: ==2191877== ==2191877== ==2191877== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==2191877== ==2191877== ==2191877== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2191877== ==2191877== ==2191877== ==2191877== HEAP SUMMARY: ==2191877== in use at exit: 700,688 bytes in 9,374 blocks ==2191877== total heap usage: 20,194,386 allocs, 20,185,012 frees, 2,578,024,188 bytes allocated ==2191877== ==2191877== LEAK SUMMARY: ==2191877== definitely lost: 0 bytes in 0 blocks ==2191877== indirectly lost: 0 bytes in 0 blocks ==2191877== possibly lost: 0 bytes in 0 blocks ==2191877== still reachable: 56 bytes in 3 blocks ==2191877== suppressed: 700,632 bytes in 9,371 blocks ==2191877== Reachable blocks (those to which a pointer was found) are not shown. ==2191877== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2191877== ==2191877== For lists of detected and suppressed errors, rerun with: -s ==2191877== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)