==2191943== Memcheck, a memory error detector ==2191943== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2191943== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2191943== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPottsUpdateRules -malloc_debug -malloc_dump -memory_info ==2191943== Parent PID: 2190178 ==2191943== ==2191943== ==2191943== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2191943== Open file descriptor 12: ==2191943== at 0xE79022D: pipe (pipe.c:29) ==2191943== by 0x18A0407D: ??? ==2191943== by 0x12F554CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191943== by 0xE09A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191943== by 0xE033D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191943== by 0xCD2AD38: PetscInitialize (pinit.c:924) ==2191943== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191943== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191943== by 0x132FE7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2191943== by 0x12BA95: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191943== by 0x12E816: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191943== by 0x12E6B6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191943== by 0x12ED4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191943== by 0x129DC5: main (TestPottsUpdateRules.cpp:19) ==2191943== ==2191943== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2191943== at 0xE794BCC: __open_nocancel (open64_nocancel.c:39) ==2191943== by 0xE718C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2191943== by 0xCBD2822: ??? ==2191943== by 0xCBD296F: ??? ==2191943== by 0x12FFA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191943== by 0x12FFA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191943== by 0x12FB0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2191943== by 0x12F552DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2191943== by 0xE09A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191943== by 0xE033D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2191943== by 0xCD2AD38: PetscInitialize (pinit.c:924) ==2191943== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2191943== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2191943== by 0x132FE7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2191943== by 0x12BA95: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2191943== by 0x12E816: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2191943== by 0x12E6B6: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2191943== by 0x12ED4D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2191943== by 0x129DC5: main (TestPottsUpdateRules.cpp:19) ==2191943== ==2191943== Open file descriptor 113: ==2191943== ==2191943== ==2191943== Open file descriptor 110: ==2191943== ==2191943== ==2191943== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPottsUpdateRules_valgrind.txt ==2191943== ==2191943== ==2191943== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2191943== ==2191943== ==2191943== ==2191943== HEAP SUMMARY: ==2191943== in use at exit: 700,759 bytes in 9,378 blocks ==2191943== total heap usage: 69,270 allocs, 59,892 frees, 1,355,014,123 bytes allocated ==2191943== ==2191943== LEAK SUMMARY: ==2191943== definitely lost: 0 bytes in 0 blocks ==2191943== indirectly lost: 0 bytes in 0 blocks ==2191943== possibly lost: 0 bytes in 0 blocks ==2191943== still reachable: 56 bytes in 3 blocks ==2191943== suppressed: 700,703 bytes in 9,375 blocks ==2191943== Reachable blocks (those to which a pointer was found) are not shown. ==2191943== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2191943== ==2191943== For lists of detected and suppressed errors, rerun with: -s ==2191943== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)