==2205695== Memcheck, a memory error detector ==2205695== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2205695== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2205695== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2205695== Parent PID: 2190178 ==2205695== ==2205695== ==2205695== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2205695== Open file descriptor 12: ==2205695== at 0x100EC22D: pipe (pipe.c:29) ==2205695== by 0x18A0507D: ??? ==2205695== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2205695== by 0xF90F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2205695== by 0xF8A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2205695== by 0xE57FD38: PetscInitialize (pinit.c:924) ==2205695== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2205695== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2205695== by 0x1299FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2205695== by 0x124BA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2205695== by 0x127222: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2205695== by 0x1270C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2205695== by 0x127759: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2205695== by 0x122ED5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==2205695== ==2205695== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2205695== at 0x100F0BCC: __open_nocancel (open64_nocancel.c:39) ==2205695== by 0x10074C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2205695== by 0xF809822: ??? ==2205695== by 0xF80996F: ??? ==2205695== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2205695== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2205695== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2205695== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2205695== by 0xF90F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2205695== by 0xF8A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2205695== by 0xE57FD38: PetscInitialize (pinit.c:924) ==2205695== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2205695== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2205695== by 0x1299FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2205695== by 0x124BA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2205695== by 0x127222: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2205695== by 0x1270C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2205695== by 0x127759: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2205695== by 0x122ED5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==2205695== ==2205695== Open file descriptor 113: ==2205695== ==2205695== ==2205695== Open file descriptor 110: ==2205695== ==2205695== ==2205695== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==2205695== ==2205695== ==2205695== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2205695== ==2205695== ==2205695== ==2205695== HEAP SUMMARY: ==2205695== in use at exit: 700,759 bytes in 9,378 blocks ==2205695== total heap usage: 1,401,130 allocs, 1,391,752 frees, 1,413,584,659 bytes allocated ==2205695== ==2205695== LEAK SUMMARY: ==2205695== definitely lost: 0 bytes in 0 blocks ==2205695== indirectly lost: 0 bytes in 0 blocks ==2205695== possibly lost: 0 bytes in 0 blocks ==2205695== still reachable: 56 bytes in 3 blocks ==2205695== suppressed: 700,703 bytes in 9,375 blocks ==2205695== Reachable blocks (those to which a pointer was found) are not shown. ==2205695== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2205695== ==2205695== For lists of detected and suppressed errors, rerun with: -s ==2205695== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)