==2263753== Memcheck, a memory error detector ==2263753== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2263753== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2263753== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==2263753== Parent PID: 2262608 ==2263753== ==2263753== ==2263753== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2263753== Open file descriptor 12: ==2263753== at 0xE40722D: pipe (pipe.c:29) ==2263753== by 0x18A0807D: ??? ==2263753== by 0x12F564CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2263753== by 0xE058418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2263753== by 0xDFF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2263753== by 0xCCC8D38: PetscInitialize (pinit.c:924) ==2263753== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2263753== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2263753== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2263753== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2263753== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2263753== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2263753== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2263753== by 0x113935: main (TestCellSrn.cpp:18) ==2263753== ==2263753== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2263753== at 0xE40BBCC: __open_nocancel (open64_nocancel.c:39) ==2263753== by 0xE38FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2263753== by 0xDF52822: ??? ==2263753== by 0xDF5296F: ??? ==2263753== by 0x12FFB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2263753== by 0x12FFB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2263753== by 0x12FB1922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2263753== by 0x12F562DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2263753== by 0xE058418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2263753== by 0xDFF1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2263753== by 0xCCC8D38: PetscInitialize (pinit.c:924) ==2263753== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2263753== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2263753== by 0x119821: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2263753== by 0x115133: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2263753== by 0x117438: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2263753== by 0x117333: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2263753== by 0x117947: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2263753== by 0x113935: main (TestCellSrn.cpp:18) ==2263753== ==2263753== Open file descriptor 115: ==2263753== ==2263753== ==2263753== Open file descriptor 111: ==2263753== ==2263753== ==2263753== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==2263753== ==2263753== ==2263753== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2263753== ==2263753== ==2263753== ==2263753== HEAP SUMMARY: ==2263753== in use at exit: 700,823 bytes in 9,379 blocks ==2263753== total heap usage: 65,099 allocs, 55,720 frees, 1,354,424,093 bytes allocated ==2263753== ==2263753== LEAK SUMMARY: ==2263753== definitely lost: 0 bytes in 0 blocks ==2263753== indirectly lost: 0 bytes in 0 blocks ==2263753== possibly lost: 0 bytes in 0 blocks ==2263753== still reachable: 120 bytes in 4 blocks ==2263753== suppressed: 700,703 bytes in 9,375 blocks ==2263753== Reachable blocks (those to which a pointer was found) are not shown. ==2263753== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2263753== ==2263753== For lists of detected and suppressed errors, rerun with: -s ==2263753== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)