==2278168== Memcheck, a memory error detector ==2278168== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2278168== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2278168== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==2278168== Parent PID: 2262608 ==2278168== ==2278168== ==2278168== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2278168== Open file descriptor 12: ==2278168== at 0x1029322D: pipe (pipe.c:29) ==2278168== by 0x1A6C807D: ??? ==2278168== by 0x148694CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2278168== by 0xFB9D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2278168== by 0xFB36D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2278168== by 0xE82DD38: PetscInitialize (pinit.c:924) ==2278168== by 0xE6A30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2278168== by 0xE6A3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2278168== by 0x193403: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2278168== by 0x18B16B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2278168== by 0x18E768: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2278168== by 0x18E608: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2278168== by 0x18EC9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2278168== by 0x186F55: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==2278168== ==2278168== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2278168== at 0x10297BCC: __open_nocancel (open64_nocancel.c:39) ==2278168== by 0x1021BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2278168== by 0xE6D7822: ??? ==2278168== by 0xE6D796F: ??? ==2278168== by 0x1490E6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2278168== by 0x1490E938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2278168== by 0x148C4922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2278168== by 0x148692DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2278168== by 0xFB9D418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2278168== by 0xFB36D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2278168== by 0xE82DD38: PetscInitialize (pinit.c:924) ==2278168== by 0xE6A30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2278168== by 0xE6A3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2278168== by 0x193403: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2278168== by 0x18B16B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2278168== by 0x18E768: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2278168== by 0x18E608: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2278168== by 0x18EC9F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2278168== by 0x186F55: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==2278168== ==2278168== Open file descriptor 115: ==2278168== ==2278168== ==2278168== Open file descriptor 111: ==2278168== ==2278168== ==2278168== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==2278168== ==2278168== ==2278168== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2278168== ==2278168== ==2278168== ==2278168== HEAP SUMMARY: ==2278168== in use at exit: 700,839 bytes in 9,379 blocks ==2278168== total heap usage: 863,767 allocs, 854,388 frees, 1,475,949,579 bytes allocated ==2278168== ==2278168== LEAK SUMMARY: ==2278168== definitely lost: 0 bytes in 0 blocks ==2278168== indirectly lost: 0 bytes in 0 blocks ==2278168== possibly lost: 0 bytes in 0 blocks ==2278168== still reachable: 120 bytes in 4 blocks ==2278168== suppressed: 700,719 bytes in 9,375 blocks ==2278168== Reachable blocks (those to which a pointer was found) are not shown. ==2278168== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2278168== ==2278168== For lists of detected and suppressed errors, rerun with: -s ==2278168== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)