==2264582== Memcheck, a memory error detector ==2264582== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2264582== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2264582== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulation -malloc_debug -malloc_dump -memory_info ==2264582== Parent PID: 2262608 ==2264582== ==2264582== ==2264582== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2264582== Open file descriptor 12: ==2264582== at 0xEC7A22D: pipe (pipe.c:29) ==2264582== by 0x18A0507D: ??? ==2264582== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2264582== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2264582== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2264582== by 0xF566D38: PetscInitialize (pinit.c:924) ==2264582== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2264582== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2264582== by 0x31194C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2264582== by 0x307C69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2264582== by 0x30C070: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2264582== by 0x30BF10: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2264582== by 0x30C5A7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2264582== by 0x305F55: main (TestOffLatticeSimulation.cpp:19) ==2264582== ==2264582== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2264582== at 0xEC7EBCC: __open_nocancel (open64_nocancel.c:39) ==2264582== by 0xEC02C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2264582== by 0xE48C822: ??? ==2264582== by 0xE48C96F: ??? ==2264582== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2264582== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2264582== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2264582== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2264582== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2264582== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2264582== by 0xF566D38: PetscInitialize (pinit.c:924) ==2264582== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2264582== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2264582== by 0x31194C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2264582== by 0x307C69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2264582== by 0x30C070: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2264582== by 0x30BF10: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2264582== by 0x30C5A7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2264582== by 0x305F55: main (TestOffLatticeSimulation.cpp:19) ==2264582== ==2264582== Open file descriptor 115: ==2264582== ==2264582== ==2264582== Open file descriptor 111: ==2264582== ==2264582== ==2264582== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulation_valgrind.txt ==2264582== ==2264582== ==2264582== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2264582== ==2264582== ==2264582== ==2264582== HEAP SUMMARY: ==2264582== in use at exit: 700,688 bytes in 9,374 blocks ==2264582== total heap usage: 12,851,212 allocs, 12,841,838 frees, 3,876,760,789 bytes allocated ==2264582== ==2264582== LEAK SUMMARY: ==2264582== definitely lost: 0 bytes in 0 blocks ==2264582== indirectly lost: 0 bytes in 0 blocks ==2264582== possibly lost: 0 bytes in 0 blocks ==2264582== still reachable: 56 bytes in 3 blocks ==2264582== suppressed: 700,632 bytes in 9,371 blocks ==2264582== Reachable blocks (those to which a pointer was found) are not shown. ==2264582== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2264582== ==2264582== For lists of detected and suppressed errors, rerun with: -s ==2264582== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)