==2320568== Memcheck, a memory error detector ==2320568== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2320568== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2320568== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/Test2dVertexBasedSimulationWithSrnModels -malloc_debug -malloc_dump -memory_info ==2320568== Parent PID: 2318753 ==2320568== ==2320568== ==2320568== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2320568== Open file descriptor 12: ==2320568== at 0xEB4F22D: pipe (pipe.c:29) ==2320568== by 0x18A0707D: ??? ==2320568== by 0x140084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320568== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320568== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320568== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2320568== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320568== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320568== by 0x1222F6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2320568== by 0x11DA65: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320568== by 0x11FE54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320568== by 0x11FCF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320568== by 0x12038B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320568== by 0x11BD95: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==2320568== ==2320568== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2320568== at 0xEB53BCC: __open_nocancel (open64_nocancel.c:39) ==2320568== by 0xEAD7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2320568== by 0xE48C822: ??? ==2320568== by 0xE48C96F: ??? ==2320568== by 0x140AD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320568== by 0x140AD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320568== by 0x14063922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320568== by 0x140082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320568== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320568== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320568== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2320568== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320568== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320568== by 0x1222F6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2320568== by 0x11DA65: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320568== by 0x11FE54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320568== by 0x11FCF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320568== by 0x12038B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320568== by 0x11BD95: main (Test2dVertexBasedSimulationWithSrnModels.cpp:19) ==2320568== ==2320568== Open file descriptor 115: ==2320568== ==2320568== ==2320568== Open file descriptor 111: ==2320568== ==2320568== ==2320568== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/Test2dVertexBasedSimulationWithSrnModels_valgrind.txt ==2320568== ==2320568== ==2320568== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2320568== ==2320568== ==2320568== ==2320568== HEAP SUMMARY: ==2320568== in use at exit: 700,759 bytes in 9,378 blocks ==2320568== total heap usage: 1,126,603 allocs, 1,117,225 frees, 1,431,032,170 bytes allocated ==2320568== ==2320568== LEAK SUMMARY: ==2320568== definitely lost: 0 bytes in 0 blocks ==2320568== indirectly lost: 0 bytes in 0 blocks ==2320568== possibly lost: 0 bytes in 0 blocks ==2320568== still reachable: 56 bytes in 3 blocks ==2320568== suppressed: 700,703 bytes in 9,375 blocks ==2320568== Reachable blocks (those to which a pointer was found) are not shown. ==2320568== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2320568== ==2320568== For lists of detected and suppressed errors, rerun with: -s ==2320568== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)