==2320288== Memcheck, a memory error detector ==2320288== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2320288== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2320288== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestAlarcon2004OxygenBasedCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==2320288== Parent PID: 2318753 ==2320288== ==2320288== ==2320288== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2320288== Open file descriptor 12: ==2320288== at 0xE68E22D: pipe (pipe.c:29) ==2320288== by 0x18A0607D: ??? ==2320288== by 0x12FA74CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320288== by 0xE2DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320288== by 0xE276D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320288== by 0xCF6DD38: PetscInitialize (pinit.c:924) ==2320288== by 0xCDE30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320288== by 0xCDE3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320288== by 0x123229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2320288== by 0x11E723: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320288== by 0x120D04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320288== by 0x120C00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320288== by 0x121213: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320288== by 0x11CF25: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==2320288== ==2320288== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2320288== at 0xE692BCC: __open_nocancel (open64_nocancel.c:39) ==2320288== by 0xE616C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2320288== by 0xCE17822: ??? ==2320288== by 0xCE1796F: ??? ==2320288== by 0x1304C6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320288== by 0x1304C938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320288== by 0x13002922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320288== by 0x12FA72DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320288== by 0xE2DD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320288== by 0xE276D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320288== by 0xCF6DD38: PetscInitialize (pinit.c:924) ==2320288== by 0xCDE30B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320288== by 0xCDE3101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320288== by 0x123229: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2320288== by 0x11E723: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320288== by 0x120D04: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320288== by 0x120C00: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320288== by 0x121213: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320288== by 0x11CF25: main (TestAlarcon2004OxygenBasedCellCycleOdeSystem.cpp:18) ==2320288== ==2320288== Open file descriptor 115: ==2320288== ==2320288== ==2320288== Open file descriptor 111: ==2320288== ==2320288== ==2320288== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestAlarcon2004OxygenBasedCellCycleOdeSystem_valgrind.txt ==2320288== ==2320288== ==2320288== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2320288== ==2320288== ==2320288== ==2320288== HEAP SUMMARY: ==2320288== in use at exit: 700,727 bytes in 9,377 blocks ==2320288== total heap usage: 167,859 allocs, 158,482 frees, 1,364,676,033 bytes allocated ==2320288== ==2320288== LEAK SUMMARY: ==2320288== definitely lost: 0 bytes in 0 blocks ==2320288== indirectly lost: 0 bytes in 0 blocks ==2320288== possibly lost: 0 bytes in 0 blocks ==2320288== still reachable: 24 bytes in 2 blocks ==2320288== suppressed: 700,703 bytes in 9,375 blocks ==2320288== Reachable blocks (those to which a pointer was found) are not shown. ==2320288== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2320288== ==2320288== For lists of detected and suppressed errors, rerun with: -s ==2320288== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)