==2320336== Memcheck, a memory error detector ==2320336== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2320336== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2320336== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==2320336== Parent PID: 2318753 ==2320336== ==2320336== ==2320336== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2320336== Open file descriptor 12: ==2320336== at 0xD2D922D: pipe (pipe.c:29) ==2320336== by 0x18A0607D: ??? ==2320336== by 0x140164CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320336== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320336== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320336== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2320336== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320336== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320336== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2320336== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320336== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320336== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320336== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320336== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==2320336== ==2320336== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2320336== at 0xD2DDBCC: __open_nocancel (open64_nocancel.c:39) ==2320336== by 0xD261C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2320336== by 0xCBD2822: ??? ==2320336== by 0xCBD296F: ??? ==2320336== by 0x140BB6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320336== by 0x140BB938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320336== by 0x14071922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320336== by 0x140162DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320336== by 0x107EF418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320336== by 0x10788D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320336== by 0xF47FD38: PetscInitialize (pinit.c:924) ==2320336== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320336== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320336== by 0x132B66: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2320336== by 0x12BE63: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320336== by 0x12E9B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320336== by 0x12E8B3: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320336== by 0x12EEC7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320336== by 0x12A665: main (TestCaUpdateRules.cpp:18) ==2320336== ==2320336== Open file descriptor 115: ==2320336== ==2320336== ==2320336== Open file descriptor 111: ==2320336== ==2320336== ==2320336== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==2320336== ==2320336== ==2320336== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2320336== ==2320336== ==2320336== ==2320336== HEAP SUMMARY: ==2320336== in use at exit: 700,759 bytes in 9,378 blocks ==2320336== total heap usage: 57,490 allocs, 48,112 frees, 1,354,219,844 bytes allocated ==2320336== ==2320336== LEAK SUMMARY: ==2320336== definitely lost: 0 bytes in 0 blocks ==2320336== indirectly lost: 0 bytes in 0 blocks ==2320336== possibly lost: 0 bytes in 0 blocks ==2320336== still reachable: 56 bytes in 3 blocks ==2320336== suppressed: 700,703 bytes in 9,375 blocks ==2320336== Reachable blocks (those to which a pointer was found) are not shown. ==2320336== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2320336== ==2320336== For lists of detected and suppressed errors, rerun with: -s ==2320336== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)