==2318756== Memcheck, a memory error detector ==2318756== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2318756== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2318756== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==2318756== Parent PID: 2318753 ==2318756== ==2318756== ==2318756== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2318756== Open file descriptor 12: ==2318756== at 0x4CAE22D: pipe (pipe.c:29) ==2318756== by 0xAEA107D: ??? ==2318756== by 0x89B54CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2318756== by 0x6268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318756== by 0x6201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318756== by 0x4EF8D38: PetscInitialize (pinit.c:924) ==2318756== by 0x48FA0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2318756== by 0x48FA101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2318756== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==2318756== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==2318756== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==2318756== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==2318756== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==2318756== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==2318756== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2318756== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2318756== by 0x110C15: main (TestCitations.cpp:18) ==2318756== ==2318756== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2318756== at 0x4CB2BCC: __open_nocancel (open64_nocancel.c:39) ==2318756== by 0x4C36C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2318756== by 0x492E822: ??? ==2318756== by 0x492E96F: ??? ==2318756== by 0x8A5A6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2318756== by 0x8A5A938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2318756== by 0x8A10922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2318756== by 0x89B52DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2318756== by 0x6268418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318756== by 0x6201D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2318756== by 0x4EF8D38: PetscInitialize (pinit.c:924) ==2318756== by 0x48FA0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2318756== by 0x48FA101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2318756== by 0x11862B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==2318756== by 0x118ED8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==2318756== by 0x111C4A: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==2318756== by 0x114E74: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==2318756== by 0x114D59: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==2318756== by 0x114BFF: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==2318756== by 0x114AC1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2318756== by 0x1150D5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2318756== by 0x110C15: main (TestCitations.cpp:18) ==2318756== ==2318756== Open file descriptor 115: ==2318756== ==2318756== ==2318756== Open file descriptor 111: ==2318756== ==2318756== ==2318756== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==2318756== ==2318756== ==2318756== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2318756== ==2318756== ==2318756== ==2318756== HEAP SUMMARY: ==2318756== in use at exit: 700,263 bytes in 9,377 blocks ==2318756== total heap usage: 47,516 allocs, 38,139 frees, 1,353,408,917 bytes allocated ==2318756== ==2318756== LEAK SUMMARY: ==2318756== definitely lost: 0 bytes in 0 blocks ==2318756== indirectly lost: 0 bytes in 0 blocks ==2318756== possibly lost: 0 bytes in 0 blocks ==2318756== still reachable: 24 bytes in 2 blocks ==2318756== suppressed: 700,239 bytes in 9,375 blocks ==2318756== Reachable blocks (those to which a pointer was found) are not shown. ==2318756== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2318756== ==2318756== For lists of detected and suppressed errors, rerun with: -s ==2318756== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)