==2320998== Memcheck, a memory error detector ==2320998== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2320998== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2320998== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==2320998== Parent PID: 2318753 ==2320998== ==2320998== ==2320998== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2320998== Open file descriptor 12: ==2320998== at 0xF01722D: pipe (pipe.c:29) ==2320998== by 0x18A0507D: ??? ==2320998== by 0x1400C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320998== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320998== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320998== by 0xF566D38: PetscInitialize (pinit.c:924) ==2320998== by 0xE7F50B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320998== by 0xE7F5101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320998== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2320998== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320998== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320998== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320998== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320998== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2320998== ==2320998== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2320998== at 0xF01BBCC: __open_nocancel (open64_nocancel.c:39) ==2320998== by 0xEF9FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2320998== by 0xE829822: ??? ==2320998== by 0xE82996F: ??? ==2320998== by 0x140B16DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320998== by 0x140B1938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320998== by 0x14067922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2320998== by 0x1400C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2320998== by 0x108D6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320998== by 0x1086FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2320998== by 0xF566D38: PetscInitialize (pinit.c:924) ==2320998== by 0xE7F50B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2320998== by 0xE7F5101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2320998== by 0x22567C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2320998== by 0x21ECFF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2320998== by 0x22286A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2320998== by 0x22270A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2320998== by 0x222DA1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2320998== by 0x21CFB5: main (TestOffLatticeSimulationWithPdes.cpp:19) ==2320998== ==2320998== Open file descriptor 115: ==2320998== ==2320998== ==2320998== Open file descriptor 111: ==2320998== ==2320998== ==2320998== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==2320998== ==2320998== ==2320998== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2320998== ==2320998== ==2320998== ==2320998== HEAP SUMMARY: ==2320998== in use at exit: 700,688 bytes in 9,374 blocks ==2320998== total heap usage: 7,488,370 allocs, 7,478,996 frees, 2,658,250,906 bytes allocated ==2320998== ==2320998== LEAK SUMMARY: ==2320998== definitely lost: 0 bytes in 0 blocks ==2320998== indirectly lost: 0 bytes in 0 blocks ==2320998== possibly lost: 0 bytes in 0 blocks ==2320998== still reachable: 56 bytes in 3 blocks ==2320998== suppressed: 700,632 bytes in 9,371 blocks ==2320998== Reachable blocks (those to which a pointer was found) are not shown. ==2320998== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2320998== ==2320998== For lists of detected and suppressed errors, rerun with: -s ==2320998== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)