==2334279== Memcheck, a memory error detector ==2334279== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2334279== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2334279== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==2334279== Parent PID: 2318753 ==2334279== ==2334279== ==2334279== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2334279== Open file descriptor 12: ==2334279== at 0x100ED22D: pipe (pipe.c:29) ==2334279== by 0x18A0507D: ??? ==2334279== by 0x13F684CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2334279== by 0xF910418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2334279== by 0xF8A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2334279== by 0xE580D38: PetscInitialize (pinit.c:924) ==2334279== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2334279== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2334279== by 0x1299FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2334279== by 0x124BA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2334279== by 0x127222: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2334279== by 0x1270C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2334279== by 0x127759: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2334279== by 0x122ED5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==2334279== ==2334279== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2334279== at 0x100F1BCC: __open_nocancel (open64_nocancel.c:39) ==2334279== by 0x10075C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2334279== by 0xF80A822: ??? ==2334279== by 0xF80A96F: ??? ==2334279== by 0x1400D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2334279== by 0x1400D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2334279== by 0x13FC3922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2334279== by 0x13F682DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2334279== by 0xF910418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2334279== by 0xF8A9D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2334279== by 0xE580D38: PetscInitialize (pinit.c:924) ==2334279== by 0xE4580B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2334279== by 0xE458101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2334279== by 0x1299FD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2334279== by 0x124BA5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2334279== by 0x127222: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2334279== by 0x1270C2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2334279== by 0x127759: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2334279== by 0x122ED5: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==2334279== ==2334279== Open file descriptor 115: ==2334279== ==2334279== ==2334279== Open file descriptor 111: ==2334279== ==2334279== ==2334279== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==2334279== ==2334279== ==2334279== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2334279== ==2334279== ==2334279== ==2334279== HEAP SUMMARY: ==2334279== in use at exit: 700,759 bytes in 9,378 blocks ==2334279== total heap usage: 1,401,131 allocs, 1,391,753 frees, 1,413,584,852 bytes allocated ==2334279== ==2334279== LEAK SUMMARY: ==2334279== definitely lost: 0 bytes in 0 blocks ==2334279== indirectly lost: 0 bytes in 0 blocks ==2334279== possibly lost: 0 bytes in 0 blocks ==2334279== still reachable: 56 bytes in 3 blocks ==2334279== suppressed: 700,703 bytes in 9,375 blocks ==2334279== Reachable blocks (those to which a pointer was found) are not shown. ==2334279== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2334279== ==2334279== For lists of detected and suppressed errors, rerun with: -s ==2334279== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)