==2451977== Memcheck, a memory error detector ==2451977== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2451977== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2451977== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestBidomainProblem -malloc_debug -malloc_dump -memory_info ==2451977== Parent PID: 2435613 ==2451977== ==2451977== ==2451977== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2451977== Open file descriptor 12: ==2451977== at 0xBD4322D: pipe (pipe.c:29) ==2451977== by 0x13F8307D: ??? ==2451977== by 0xF7384CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2451977== by 0xB633418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2451977== by 0xB5CCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2451977== by 0xA2C3D38: PetscInitialize (pinit.c:924) ==2451977== by 0xA1370B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2451977== by 0xA137101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2451977== by 0x14093E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2451977== by 0x13A0F5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2451977== by 0x13D7D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2451977== by 0x13D670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2451977== by 0x13DD07: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2451977== by 0x138285: main (TestBidomainProblem.cpp:19) ==2451977== ==2451977== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2451977== at 0xBD47BCC: __open_nocancel (open64_nocancel.c:39) ==2451977== by 0xBCCBC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2451977== by 0xA16B822: ??? ==2451977== by 0xA16B96F: ??? ==2451977== by 0xF7DD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2451977== by 0xF7DD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2451977== by 0xF793922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2451977== by 0xF7382DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2451977== by 0xB633418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2451977== by 0xB5CCD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2451977== by 0xA2C3D38: PetscInitialize (pinit.c:924) ==2451977== by 0xA1370B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2451977== by 0xA137101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2451977== by 0x14093E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2451977== by 0x13A0F5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2451977== by 0x13D7D0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2451977== by 0x13D670: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2451977== by 0x13DD07: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2451977== by 0x138285: main (TestBidomainProblem.cpp:19) ==2451977== ==2451977== Open file descriptor 115: ==2451977== ==2451977== ==2451977== Open file descriptor 111: ==2451977== ==2451977== ==2451977== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestBidomainProblem_valgrind.txt ==2451977== ==2451977== ==2451977== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2451977== ==2451977== ==2451977== ==2451977== HEAP SUMMARY: ==2451977== in use at exit: 701,223 bytes in 9,387 blocks ==2451977== total heap usage: 588,788 allocs, 579,401 frees, 1,564,818,757 bytes allocated ==2451977== ==2451977== LEAK SUMMARY: ==2451977== definitely lost: 0 bytes in 0 blocks ==2451977== indirectly lost: 0 bytes in 0 blocks ==2451977== possibly lost: 0 bytes in 0 blocks ==2451977== still reachable: 24 bytes in 2 blocks ==2451977== suppressed: 701,199 bytes in 9,385 blocks ==2451977== Reachable blocks (those to which a pointer was found) are not shown. ==2451977== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2451977== ==2451977== For lists of detected and suppressed errors, rerun with: -s ==2451977== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 104 from 39)