==2438086== Memcheck, a memory error detector ==2438086== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2438086== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2438086== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2438086== Parent PID: 2435613 ==2438086== ==2438086== ==2438086== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2438086== Open file descriptor 12: ==2438086== at 0xF0F522D: pipe (pipe.c:29) ==2438086== by 0x18A0407D: ??? ==2438086== by 0x1412B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2438086== by 0x10D51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2438086== by 0x10CEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2438086== by 0xF9E1D38: PetscInitialize (pinit.c:924) ==2438086== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2438086== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2438086== by 0x1D25D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2438086== by 0x1CBF69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2438086== by 0x1CF704: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2438086== by 0x1CF5A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2438086== by 0x1CFC3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2438086== by 0x1CA255: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==2438086== ==2438086== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2438086== at 0xF0F9BCC: __open_nocancel (open64_nocancel.c:39) ==2438086== by 0xF07DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2438086== by 0xE48B822: ??? ==2438086== by 0xE48B96F: ??? ==2438086== by 0x141D06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2438086== by 0x141D0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2438086== by 0x14186922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2438086== by 0x1412B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2438086== by 0x10D51418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2438086== by 0x10CEAD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2438086== by 0xF9E1D38: PetscInitialize (pinit.c:924) ==2438086== by 0xE4570B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2438086== by 0xE457101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2438086== by 0x1D25D2: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==2438086== by 0x1CBF69: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2438086== by 0x1CF704: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2438086== by 0x1CF5A4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2438086== by 0x1CFC3B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2438086== by 0x1CA255: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==2438086== ==2438086== Open file descriptor 115: ==2438086== ==2438086== ==2438086== Open file descriptor 111: ==2438086== ==2438086== ==2438086== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==2438086== ==2438086== ==2438086== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2438086== ==2438086== ==2438086== ==2438086== HEAP SUMMARY: ==2438086== in use at exit: 700,688 bytes in 9,374 blocks ==2438086== total heap usage: 7,097,352 allocs, 7,087,978 frees, 8,099,009,355 bytes allocated ==2438086== ==2438086== LEAK SUMMARY: ==2438086== definitely lost: 0 bytes in 0 blocks ==2438086== indirectly lost: 0 bytes in 0 blocks ==2438086== possibly lost: 0 bytes in 0 blocks ==2438086== still reachable: 56 bytes in 3 blocks ==2438086== suppressed: 700,632 bytes in 9,371 blocks ==2438086== Reachable blocks (those to which a pointer was found) are not shown. ==2438086== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2438086== ==2438086== For lists of detected and suppressed errors, rerun with: -s ==2438086== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 42 from 42)