==2436844== Memcheck, a memory error detector ==2436844== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2436844== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2436844== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestSimpleCellCycleModels -malloc_debug -malloc_dump -memory_info ==2436844== Parent PID: 2435613 ==2436844== ==2436844== ==2436844== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2436844== Open file descriptor 12: ==2436844== at 0xE44922D: pipe (pipe.c:29) ==2436844== by 0x18A0407D: ??? ==2436844== by 0x12F554CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2436844== by 0xE09A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2436844== by 0xE033D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2436844== by 0xCD2AD38: PetscInitialize (pinit.c:924) ==2436844== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2436844== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2436844== by 0x138D09: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2436844== by 0x1314B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2436844== by 0x134584: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2436844== by 0x134424: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2436844== by 0x134ABB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2436844== by 0x12D2E5: main (TestSimpleCellCycleModels.cpp:19) ==2436844== ==2436844== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2436844== at 0xE44DBCC: __open_nocancel (open64_nocancel.c:39) ==2436844== by 0xE3D1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2436844== by 0xCBD2822: ??? ==2436844== by 0xCBD296F: ??? ==2436844== by 0x12FFA6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2436844== by 0x12FFA938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2436844== by 0x12FB0922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2436844== by 0x12F552DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2436844== by 0xE09A418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2436844== by 0xE033D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2436844== by 0xCD2AD38: PetscInitialize (pinit.c:924) ==2436844== by 0xCB9E0B3: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2436844== by 0xCB9E101: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2436844== by 0x138D09: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2436844== by 0x1314B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2436844== by 0x134584: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2436844== by 0x134424: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2436844== by 0x134ABB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2436844== by 0x12D2E5: main (TestSimpleCellCycleModels.cpp:19) ==2436844== ==2436844== Open file descriptor 115: ==2436844== ==2436844== ==2436844== Open file descriptor 111: ==2436844== ==2436844== ==2436844== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestSimpleCellCycleModels_valgrind.txt ==2436844== ==2436844== ==2436844== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2436844== ==2436844== ==2436844== ==2436844== HEAP SUMMARY: ==2436844== in use at exit: 700,791 bytes in 9,379 blocks ==2436844== total heap usage: 80,693 allocs, 71,314 frees, 1,357,299,720 bytes allocated ==2436844== ==2436844== LEAK SUMMARY: ==2436844== definitely lost: 0 bytes in 0 blocks ==2436844== indirectly lost: 0 bytes in 0 blocks ==2436844== possibly lost: 0 bytes in 0 blocks ==2436844== still reachable: 88 bytes in 4 blocks ==2436844== suppressed: 700,703 bytes in 9,375 blocks ==2436844== Reachable blocks (those to which a pointer was found) are not shown. ==2436844== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2436844== ==2436844== For lists of detected and suppressed errors, rerun with: -s ==2436844== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)