==2496395== Memcheck, a memory error detector ==2496395== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2496395== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2496395== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/io/test/TestColumnDataReaderWriter -malloc_debug -malloc_dump -memory_info ==2496395== Parent PID: 2496142 ==2496395== ==2496395== ==2496395== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2496395== Open file descriptor 12: ==2496395== at 0x61D722D: pipe (pipe.c:29) ==2496395== by 0xAF1507D: ??? ==2496395== by 0x8A294CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2496395== by 0x5E28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496395== by 0x5DC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496395== by 0x4A96D38: PetscInitialize (pinit.c:924) ==2496395== by 0x496D23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2496395== by 0x496D28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2496395== by 0x11A5F3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2496395== by 0x1157E5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2496395== by 0x118638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2496395== by 0x1184D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2496395== by 0x118B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2496395== by 0x113B15: main (TestColumnDataReaderWriter.cpp:19) ==2496395== ==2496395== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2496395== at 0x61DBBCC: __open_nocancel (open64_nocancel.c:39) ==2496395== by 0x615FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2496395== by 0x5D20822: ??? ==2496395== by 0x5D2096F: ??? ==2496395== by 0x8AD06DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2496395== by 0x8AD0938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2496395== by 0x8A86922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2496395== by 0x8A292DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2496395== by 0x5E28418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496395== by 0x5DC1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2496395== by 0x4A96D38: PetscInitialize (pinit.c:924) ==2496395== by 0x496D23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2496395== by 0x496D28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2496395== by 0x11A5F3: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2496395== by 0x1157E5: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2496395== by 0x118638: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2496395== by 0x1184D8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2496395== by 0x118B6F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2496395== by 0x113B15: main (TestColumnDataReaderWriter.cpp:19) ==2496395== ==2496395== Open file descriptor 115: ==2496395== ==2496395== ==2496395== Open file descriptor 111: ==2496395== ==2496395== ==2496395== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestColumnDataReaderWriter_valgrind.txt ==2496395== ==2496395== ==2496395== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2496395== ==2496395== ==2496395== ==2496395== HEAP SUMMARY: ==2496395== in use at exit: 700,279 bytes in 9,377 blocks ==2496395== total heap usage: 64,220 allocs, 54,843 frees, 1,356,318,230 bytes allocated ==2496395== ==2496395== LEAK SUMMARY: ==2496395== definitely lost: 0 bytes in 0 blocks ==2496395== indirectly lost: 0 bytes in 0 blocks ==2496395== possibly lost: 0 bytes in 0 blocks ==2496395== still reachable: 24 bytes in 2 blocks ==2496395== suppressed: 700,255 bytes in 9,375 blocks ==2496395== Reachable blocks (those to which a pointer was found) are not shown. ==2496395== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2496395== ==2496395== For lists of detected and suppressed errors, rerun with: -s ==2496395== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)