==2511616== Memcheck, a memory error detector ==2511616== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2511616== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2511616== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==2511616== Parent PID: 2496142 ==2511616== ==2511616== ==2511616== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2511616== Open file descriptor 12: ==2511616== at 0x110D322D: pipe (pipe.c:29) ==2511616== by 0x1976707D: ??? ==2511616== by 0x14D1F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2511616== by 0x108F6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511616== by 0x1088FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511616== by 0xF586D38: PetscInitialize (pinit.c:924) ==2511616== by 0xF3FB23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2511616== by 0xF3FB28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2511616== by 0x261BE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2511616== by 0x25A30B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2511616== by 0x25EE8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2511616== by 0x25ED2F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2511616== by 0x25F3C5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2511616== by 0x255E35: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2511616== ==2511616== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2511616== at 0x110D7BCC: __open_nocancel (open64_nocancel.c:39) ==2511616== by 0x1105BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2511616== by 0xF430822: ??? ==2511616== by 0xF43096F: ??? ==2511616== by 0x14DC46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2511616== by 0x14DC4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2511616== by 0x14D7A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2511616== by 0x14D1F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2511616== by 0x108F6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511616== by 0x1088FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2511616== by 0xF586D38: PetscInitialize (pinit.c:924) ==2511616== by 0xF3FB23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2511616== by 0xF3FB28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2511616== by 0x261BE5: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2511616== by 0x25A30B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2511616== by 0x25EE8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2511616== by 0x25ED2F: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2511616== by 0x25F3C5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2511616== by 0x255E35: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==2511616== ==2511616== Open file descriptor 115: ==2511616== ==2511616== ==2511616== Open file descriptor 111: ==2511616== ==2511616== ==2511616== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==2511616== ==2511616== ==2511616== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2511616== ==2511616== ==2511616== ==2511616== HEAP SUMMARY: ==2511616== in use at exit: 700,688 bytes in 9,374 blocks ==2511616== total heap usage: 3,821,140 allocs, 3,811,766 frees, 1,524,984,320 bytes allocated ==2511616== ==2511616== LEAK SUMMARY: ==2511616== definitely lost: 0 bytes in 0 blocks ==2511616== indirectly lost: 0 bytes in 0 blocks ==2511616== possibly lost: 0 bytes in 0 blocks ==2511616== still reachable: 56 bytes in 3 blocks ==2511616== suppressed: 700,632 bytes in 9,371 blocks ==2511616== Reachable blocks (those to which a pointer was found) are not shown. ==2511616== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2511616== ==2511616== For lists of detected and suppressed errors, rerun with: -s ==2511616== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 31 from 31)