==2512102== Memcheck, a memory error detector ==2512102== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2512102== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2512102== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==2512102== Parent PID: 2496142 ==2512102== ==2512102== ==2512102== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2512102== Open file descriptor 12: ==2512102== at 0x1266922D: pipe (pipe.c:29) ==2512102== by 0x1B42707D: ??? ==2512102== by 0x1658B4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2512102== by 0x11F73418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2512102== by 0x11F0CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2512102== by 0x10C03D38: PetscInitialize (pinit.c:924) ==2512102== by 0x10A7823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2512102== by 0x10A7828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2512102== by 0x2247E7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2512102== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2512102== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2512102== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2512102== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2512102== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==2512102== ==2512102== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2512102== at 0x1266DBCC: __open_nocancel (open64_nocancel.c:39) ==2512102== by 0x125F1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2512102== by 0x10AAD822: ??? ==2512102== by 0x10AAD96F: ??? ==2512102== by 0x166306DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2512102== by 0x16630938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2512102== by 0x165E6922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2512102== by 0x1658B2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2512102== by 0x11F73418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2512102== by 0x11F0CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2512102== by 0x10C03D38: PetscInitialize (pinit.c:924) ==2512102== by 0x10A7823F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2512102== by 0x10A7828D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2512102== by 0x2247E7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2512102== by 0x21BFE9: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2512102== by 0x21FBF0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2512102== by 0x21FA90: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2512102== by 0x220127: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2512102== by 0x21A2D5: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==2512102== ==2512102== Open file descriptor 115: ==2512102== ==2512102== ==2512102== Open file descriptor 111: ==2512102== ==2512102== ==2512102== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==2512102== ==2512102== ==2512102== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2512102== ==2512102== ==2512102== ==2512102== HEAP SUMMARY: ==2512102== in use at exit: 700,704 bytes in 9,374 blocks ==2512102== total heap usage: 3,720,583 allocs, 3,711,209 frees, 1,636,767,634 bytes allocated ==2512102== ==2512102== LEAK SUMMARY: ==2512102== definitely lost: 0 bytes in 0 blocks ==2512102== indirectly lost: 0 bytes in 0 blocks ==2512102== possibly lost: 0 bytes in 0 blocks ==2512102== still reachable: 56 bytes in 3 blocks ==2512102== suppressed: 700,648 bytes in 9,371 blocks ==2512102== Reachable blocks (those to which a pointer was found) are not shown. ==2512102== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2512102== ==2512102== For lists of detected and suppressed errors, rerun with: -s ==2512102== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)