==2497768== Memcheck, a memory error detector ==2497768== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==2497768== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==2497768== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==2497768== Parent PID: 2496142 ==2497768== ==2497768== ==2497768== FILE DESCRIPTORS: 9 open (3 std) at exit. ==2497768== Open file descriptor 12: ==2497768== at 0xF06B22D: pipe (pipe.c:29) ==2497768== by 0x1976707D: ??? ==2497768== by 0x13D084CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2497768== by 0xECBA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2497768== by 0xEC53D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2497768== by 0xD94AD38: PetscInitialize (pinit.c:924) ==2497768== by 0xD7BF23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2497768== by 0xD7BF28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2497768== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2497768== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2497768== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2497768== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2497768== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2497768== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==2497768== ==2497768== Open file descriptor 8: /dev/shm/open_mpi.0000 ==2497768== at 0xF06FBCC: __open_nocancel (open64_nocancel.c:39) ==2497768== by 0xEFF3C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==2497768== by 0xD7F4822: ??? ==2497768== by 0xD7F496F: ??? ==2497768== by 0x13DAD6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2497768== by 0x13DAD938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2497768== by 0x13D63922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==2497768== by 0x13D082DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==2497768== by 0xECBA418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2497768== by 0xEC53D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==2497768== by 0xD94AD38: PetscInitialize (pinit.c:924) ==2497768== by 0xD7BF23F: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==2497768== by 0xD7BF28D: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==2497768== by 0x124157: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==2497768== by 0x11F6A3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==2497768== by 0x121BF4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==2497768== by 0x121AF0: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==2497768== by 0x122103: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==2497768== by 0x11DEA5: main (TestGoldbeter1991OdeSystem.cpp:18) ==2497768== ==2497768== Open file descriptor 115: ==2497768== ==2497768== ==2497768== Open file descriptor 111: ==2497768== ==2497768== ==2497768== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==2497768== ==2497768== ==2497768== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==2497768== ==2497768== ==2497768== ==2497768== HEAP SUMMARY: ==2497768== in use at exit: 700,727 bytes in 9,377 blocks ==2497768== total heap usage: 65,558 allocs, 56,181 frees, 1,355,048,953 bytes allocated ==2497768== ==2497768== LEAK SUMMARY: ==2497768== definitely lost: 0 bytes in 0 blocks ==2497768== indirectly lost: 0 bytes in 0 blocks ==2497768== possibly lost: 0 bytes in 0 blocks ==2497768== still reachable: 24 bytes in 2 blocks ==2497768== suppressed: 700,703 bytes in 9,375 blocks ==2497768== Reachable blocks (those to which a pointer was found) are not shown. ==2497768== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==2497768== ==2497768== For lists of detected and suppressed errors, rerun with: -s ==2497768== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)